| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2744 |
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| Symbol | |
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| ID | 6111695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3033437 |
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| End bp | 3035992 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622531 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001749605 |
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| Protein GI | 170721917 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGA CGAGGATCTT TGCACCACAA AACCGCCGAC TGATCAAACT CACCACCCCC
ATCCGAGGTG ACCAGGCGTT GCTGCTGGAG CATTTCAGCG GCAATGAAGG GTTATCCACG
CTGTTCAGCT TCGAGCTGTC GTTGATCAGC CAGGATGCCA GGCTCGAACT CAAATCATTG
ATCGGCCAAC CTGCCTGTTT GGACATCGAG CTGGCCGACG GCGGCCTACG CCATATCCAT
GGCCACATCA CCCGGTTCAA CCTGCTGGGC AGCGACGGTG GCCTGGCGCG TTACAGCGCG
ACACTGAGCC CCTGGCTGTG GATGCTGTCG CGACGCATTG ATTCGCGGAT CTTTCAAGAG
CAGACCATTG AAACGGTCAT TCGCACGGTG TTCGAGCACT ACGGCGGGTT GCGCCACTTC
GAGTTTCGCC TGCTCAGGCC TCTCAAGTCC CACAGCTACA TCACCCAGTA CCGCGAAACC
GACCTGAATT TCGTGTTGCG CTTGCTGGAG CAGGACGGCC TGTTCTTCTA CTTCGATCAC
AGCAAGGACG GGCACAGCCT GATCATCACG GATCGATCCC AGGGCCTGGA AGCGCTGCCT
GAGCAACCGC AGATCCGGTA CCACAGCGCC TTTGTCACCG AGACCAGTGA CTCGATCACC
CAGTGGCGCA GCCACCGGGC CTTGCAACCG GGCAAAATGG CCATCCAGAC CTTCGATTAC
AAGCACCCAA GAAATTCGTT GTCCATCGAC ATGGACAGCC TCAATGAACA GGGCGACGTC
CCGCCCTACG AGGTCTACGA CTTTTTAGGT GCCTACAGCC ACGGCTTGCG CGATGAGGGC
GAGGCGCTGG TCCGCCGCCA CCTGGAGATC ATCGAAGCCC AGGCCAAGAC CTTTACCGGC
AGCAGCAACT GCCGGGCCAT GCGGCCGGGC TACAGCTTCG AACTGACCCA GCACTTCGAC
CACGAAGGTG GAGCGGCAGA AGCTCGCCAG TTCCTGCTGG TGTCGGTCGC GCACCAGGGG
CGCAACAACT ATTTCTCGGA TGAGCCCGCA GGTTACGACA ACCAGTTTGT CTGTATTCGC
CAGAGCATCC CTTACCGCCA CCCGATCACC GTGCCGCGCC CCGCCATCAA CGGGCCGCTC
AGCGCGATCG TAGTAGGGCC GGAGGGCGAA GAGGTCTTCA CTGACGAGCT GGCGCGGATC
CAGGTCCGGT TCCACTGGCA GCGCGGCGAC AGCCTGCCGC AGGGTACCAC CTGGGTGCGT
GTGGCGATGC CCAGCGCTGG CAGAGGTTTT GGCCATCAGT TCTTGCCACG TATCGGCCAG
GAAGTGCTGG TCACCTTCCT GGCCGGCGAT ATCGACCGCC CCGTGGTCAC CTCGGTGCTG
TACAACGCCG AGCAGACACC GCCGCGCTTC AGCAAAGCCT CGGGCCTGCC AGGCAACCGC
GCGCTTTCCG GCATCCAGAC CCAGGAGCAC AAGGGCCGCG GTTTCAACGA GCTGTTGTTC
GATGACACAC CGGGCGCCTT GCGTGCCCGC GTCGGCACCA CGCACCAGGC CACAGCGCTC
AATCTGGGCA AACTCACCGA GCCACGTACT GACGGCCAAG CCAAGGCCCG TGGCAACGGC
GCCGAATTGC GCACCGACGC CGCGATTGCC CTGCGCGCCG CCCAAGGCAT GTTGCTGACC
ACCTATGCCC GCCAGGACGC CACAGGGGCA CAGCTGGACC GCGAAGAGCT GCTCACGCTG
CTGGCCGAGT GCGGGGAGCT GTTCAAAAAC CTCGGGCAAA CCGCCGCCGC GCGAGGCGGG
GCAGCGGTAA ACAGCGAGGG CATCGACGCC TTGAGCCAGG CGCTGAAACA GTGGCCAGCG
CCCGACAGCG ACAGCCCGGG CAAGCCCGTC ATGGCCGTTG CGGCTGAGGC GGGTATCACC
AGTGCCACAC CGCGCTCGCA AACCCACTAT GCCGGTGCTA ACCACGACAC CACCGCCCAG
GACCACCTGC AGTTGACCAG CGGCGCCGCC ATGCGCCTGC AAGCCGGCAA GGGCATCAGT
GCCTTCGCCC AGGATGAGGG GATCAGTGCC ATTGCCAACC GCGGCAAAGT GCTGGTCCAG
GCCCAGGAAG ACGACATCAC CGTCAACGCA CAAAAAAACC TGCACCTGTC GGCCGCCGAA
GGCGAGGCGG TCATCACCGC GCCAACCATC CGCCTGGTGG CCGATGATGG CAGCTATATC
AAGATCGGCG GCGGTGTCGA AATCGGCAGC CAAGGCAAGG TTATCGTCCA TGCCAGCGAG
CATGACTGGG TCGGCCCCAA CACCGACAGC GCCCCGTTGC CAGCATTCAC CCGCGACCCG
GCGGCGCAAC GCCTGGCTTT CCACTACCCG GGGCACGCCG ACGACAGCGT GCGAATGGCC
GTTGACCACG CCTACCAGAT CAAACTCGAA GACGGTAGCA CCGTGCAAGG CCTGACCGAC
GCCAGCGGGC TCACCGAACA CGTCGAGCGC GAAGCGATGC ACCAGGCACA AGTGGCTGCC
TTGCGCAGCA CCGGCAGCAA AGGAGGCAGC CAATGA
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| Protein sequence | MELTRIFAPQ NRRLIKLTTP IRGDQALLLE HFSGNEGLST LFSFELSLIS QDARLELKSL
IGQPACLDIE LADGGLRHIH GHITRFNLLG SDGGLARYSA TLSPWLWMLS RRIDSRIFQE
QTIETVIRTV FEHYGGLRHF EFRLLRPLKS HSYITQYRET DLNFVLRLLE QDGLFFYFDH
SKDGHSLIIT DRSQGLEALP EQPQIRYHSA FVTETSDSIT QWRSHRALQP GKMAIQTFDY
KHPRNSLSID MDSLNEQGDV PPYEVYDFLG AYSHGLRDEG EALVRRHLEI IEAQAKTFTG
SSNCRAMRPG YSFELTQHFD HEGGAAEARQ FLLVSVAHQG RNNYFSDEPA GYDNQFVCIR
QSIPYRHPIT VPRPAINGPL SAIVVGPEGE EVFTDELARI QVRFHWQRGD SLPQGTTWVR
VAMPSAGRGF GHQFLPRIGQ EVLVTFLAGD IDRPVVTSVL YNAEQTPPRF SKASGLPGNR
ALSGIQTQEH KGRGFNELLF DDTPGALRAR VGTTHQATAL NLGKLTEPRT DGQAKARGNG
AELRTDAAIA LRAAQGMLLT TYARQDATGA QLDREELLTL LAECGELFKN LGQTAAARGG
AAVNSEGIDA LSQALKQWPA PDSDSPGKPV MAVAAEAGIT SATPRSQTHY AGANHDTTAQ
DHLQLTSGAA MRLQAGKGIS AFAQDEGISA IANRGKVLVQ AQEDDITVNA QKNLHLSAAE
GEAVITAPTI RLVADDGSYI KIGGGVEIGS QGKVIVHASE HDWVGPNTDS APLPAFTRDP
AAQRLAFHYP GHADDSVRMA VDHAYQIKLE DGSTVQGLTD ASGLTEHVER EAMHQAQVAA
LRSTGSKGGS Q
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