| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2718 |
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| Symbol | |
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| ID | 6111669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3011726 |
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| End bp | 3012496 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622505 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_001749579 |
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| Protein GI | 170721891 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.650562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.158048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA AAGGCAAGAC TGCACTCATC ACCGGTTCCA CCAGCGGCAT CGGCCTGGGC
ATCGCCCAGG TGCTGGCCCG CGCAGGCGCC AACATCCTGC TCAACGGTTT CGGCGACCCG
GCACCGGCGC TGGCCGAGGT TACGCAGCAT GGGGTGAAGG TTGCGCACCA TCCGGCCGAC
CTTGGCGATG TGGCCCAGAT AGAAGCATTG TTCGCTTTTG CCGAGCAGAC CTTCGGCGGT
GTCGACATCC TGGTCAACAA TGCGGGCATC CAGCATGTGG CGCCGGTCGA GCAGTTTCCG
GTGGAAAGCT GGGACAAGAT AATTGCCTTG AACCTGTCGG CGGTGTTCCA TGGCACGCGC
CTGGCCCTGC CCGGTATGCG TAAGCGCAAC TGGGGGCGCA TCGTCAATAT CGCCTCGGTG
CACGGGTTGG TCGGCTCCAC CGGCAAAGCC GCCTATGTGG CGGCCAAGCA CGGCGTGGTC
GGCCTGACCA AGGTGGTGGG GCTGGAAACG GCGACTGGCA ATGTCACCTG CAATGCCATC
TGCCCGGGCT GGGTGCTGAC CCCGCTGGTG CAAAAGCAGA TCGACGAACG CGCCGCCAAG
GGTGTCGCCC CCCAGCAGGC GCAAGCGGAC TTGCTGGCCG AGAAGCAACC TTCATTGGCC
TTCGTCACCC CTGAACACCT GGGCGAGCTG GTACTATTCC TGTGCAGCGA GGCCGCAAGC
CAGGTCCGCG GCGCCGCCTG GAATGTCGAT GGTGGCTGGC TGGCCCAGTG A
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| Protein sequence | MTLKGKTALI TGSTSGIGLG IAQVLARAGA NILLNGFGDP APALAEVTQH GVKVAHHPAD
LGDVAQIEAL FAFAEQTFGG VDILVNNAGI QHVAPVEQFP VESWDKIIAL NLSAVFHGTR
LALPGMRKRN WGRIVNIASV HGLVGSTGKA AYVAAKHGVV GLTKVVGLET ATGNVTCNAI
CPGWVLTPLV QKQIDERAAK GVAPQQAQAD LLAEKQPSLA FVTPEHLGEL VLFLCSEAAS
QVRGAAWNVD GGWLAQ
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