Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2717 |
Symbol | |
ID | 6111668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3010324 |
End bp | 3011715 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641622504 |
Product | citrate transporter |
Protein accession | YP_001749578 |
Protein GI | 170721890 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.203556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0827168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGC TCATCGCCCT CGCCGCTTTG GCCCTGCTGA TGCTGGCCGC CTACCGCGGT TACAGCGTGA TCCTCTTCGC ACCAATCGCC GCCCTCGGCG CGGTGCTGCT GACCGACCCC GCCGCCGTGG CGCCCGCCTT TACCGGGGTG TTCATGGAAA AGATGGTCGG CTTCATCAAG CTGTACTTTC CGGTGTTCCT GCTTGGCGCG GTGTTCGGCA AGCTCATCGA ACTGTCCGGT TTCTCGCGCT CGATCGTCGC CGCGGCCATC CGCCTGCTCG GCACCCGCCA GGCCATGCTG GTGATCGTGC TCGTTTGCGC TTTGCTCACT TATGGTGGGG TATCGCTGTT TGTGGTGGTG TTCGCGGTGT ACCCGTTCGC CGCCGAAATG TTCCGCCAAA GTGATATTCC CAAGCGCCTG ATCCCGGCAA CCATCGCCTT GGGCGCCTTC TCGTTCACCA TGGACGCCCT GCCCGGCACC CCGCAGATCC AGAACATCAT CCCCAGCACC TTCTTCAACA CCACCGCCTG GGCCGCGCCC TGGTTGGGAC TGATTGGCAC GGTGTTCGTG TTCTGCAGCG GCATGCTTTA CCTGCAACGC CAGCGTAATA AGGCCCAGCG CGCCGGCGAG GGCTATGGCA GCAACCTGCG CAACGAACCG GAAACTGCCG CCGACCTGAC CTTGCCCAAC CCATGGCTCG CGCTTTCGCC GCTGGTGCTG GTGGGGGTGA TGAACCTGCT GTTCACCCAC TGGATCCCGC AGTGGTATGG GGCCAGCCAT ACCCTGCAAC TGCCGGGCAT GAGTGCGCCG GTGAACAGCG ACGTGGCCAA GCTCACGGCG ATCTGGGCAG TGCAGGCCGC GCTGCTGGTC GGCATCCTGA TGGTGCTGGT GTGCGCCTTC GGCGCCATCC GTGAGCGCCT GGCCGAAGGC ACCAAGAGCG CTGTCGGTGG CGCTTTGCTG GCCGCCATGA ACACCGCTTC AGAATACGGC TTTGGTGCGG TGATCGCTTC GCTGCCGGGC TTTCTGGTAT TGGCCGATGC CCTGCGCGGC ATCCCCAACC CGCTGGTCAA TGAAGCTATC ACCGTGACCT TACTGGCCGG CATCACCGGC TCCGCCTCAG GCGGCATGAG CATTGCCCTG GCGGCCATGG GCGACAGCTT CATCGCTGCG GCAAACGCCG CCAACATCCC GCTCGAGGTG CTGCACCGGG TGGCCGCCAT GGCCAGCGGC GGCATGGACA CCCTGCCGCA CAACGGTGCG GTGATCACCT TGCTGGCCGT CACCGGCTTG ACCCACCGCG AGGCCTACAA AGACATTTTC GGTATTACCC TGATCAAGAC CCTGGCCGTC TTCGTGGTCA TCGCCACGTT CTACGCCACC GGCATCGTCT AA
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Protein sequence | MTVLIALAAL ALLMLAAYRG YSVILFAPIA ALGAVLLTDP AAVAPAFTGV FMEKMVGFIK LYFPVFLLGA VFGKLIELSG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV FAVYPFAAEM FRQSDIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFNTTAWAAP WLGLIGTVFV FCSGMLYLQR QRNKAQRAGE GYGSNLRNEP ETAADLTLPN PWLALSPLVL VGVMNLLFTH WIPQWYGASH TLQLPGMSAP VNSDVAKLTA IWAVQAALLV GILMVLVCAF GAIRERLAEG TKSAVGGALL AAMNTASEYG FGAVIASLPG FLVLADALRG IPNPLVNEAI TVTLLAGITG SASGGMSIAL AAMGDSFIAA ANAANIPLEV LHRVAAMASG GMDTLPHNGA VITLLAVTGL THREAYKDIF GITLIKTLAV FVVIATFYAT GIV
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