Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2696 |
Symbol | |
ID | 6111647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2985753 |
End bp | 2987933 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641622483 |
Product | methanol/ethanol family PQQ-dependent dehydrogenase |
Protein accession | YP_001749557 |
Protein GI | 170721869 |
COG category | [C] Energy production and conversion [G] Carbohydrate transport and metabolism |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGAA CAGGCCCGCA CCGTCGGCCT CTGCCGCACT TGCTGAGCTG CCTGGCCTTA AGCCTGGCGT GCAGCGCACC TGCCTTCGCC GCCGAAGTCG ACGGCCAGCG CATCATCGAA GCCGACAAGG AACCCGGCAA CTGGATGAGC CACGGCCGTA CCTATGACGA GCAGCGCTAC AGCCCGCTCA AGGCGATCAA CCAGGGCAAC GTCAACCAGC TCGGCCTTGC CTGGAGCTAC AAGCTCGACC TTGACCGTGG CGTGGAGGCA ACACCAATCG TGGTTGACGG GGTGATGTAC ACCACCGGGC CGTTTTCGGT GGTGTACGCC CTGGACGCGC GCAATGGCAC GCTGCTGTGG AAGTACGACC CGCAGTCTGA CCGCCACCGC GCCGGTGAGG CCTGTTGTGA CGCGGTCAAC CGAGGCGTGG CGGTGTGGCA GGGCAAGGTC TACGTGGGTG TGCTCGATGG CCGCCTGGAG GCGATCGATG CCAAGACCGG CAAACGTGTG TGGTCGGTGG ACACCCGCGA TGACGACAAG CGCAGCTACA CCATCACCGG GGCGCCGCGG GTGGTCAACG GCAAGGTGAT CATCGGCAAT GGCGGCGCCG AATTCGGTGT GCGCGGCTAC GTGACTGCGT ACGACGCCGA AACCGGCAAA CAGGCCTGGC GCTTCTTTAC CGTGCCGGGC GACCCCAAGC TGCCGCCCGA GAACAAAGCG ATGGAAATCG CCAGCAAGAC CTGGCACGGC GACGCTTATG TCGAGTGGGG TGGCGGCGGT ACGGCCTGGG ATTCGTTCGC CTACGACCCG GAACTCAACC TGTTGTATAT CGGCGTGGGC AATGGCTCGA TGTGGGACCC GAAATGGCGC AGCCAGGCCA AGGGCGACAA CCTGTTCCTT TCCTCGATCG TCGCGGTCAA TGCCGACACC GGCGAATACG TCTGGCACTA CCAGACCACG CCAGGCGATG CTTGGGACTT CACCGCCACC CAGCACATGA TCCTGGCCGA GCTGCCCATT GACGGCAAAC CGCGCAAAGT GCTGATGCAG GCGCCGAAAA ACGGCTTCTT CTATGTGCTG GACCGTGCTA CCGGTGAGCT GCTGTCGGCG AAGAACATCG TGCCGGTGAA CTGGGCCAAA GGTATCGACA TGAAGACCGG GCGGCCGATC TTCGACGATG AGGCGGCGGC CTACTGGAAG GACGGCAAGC GCAAGCTGGT GACCCCGGCG TTCTGGGGTG CCCACGATTG GCACCCAATG TCCTACAACC CTGACACGGG CCTGGTGTAC ATCCCGGCGC ATATCATGTC GGCCTACTAC GAGCACATCC CCGAGGCGCC GAAGCGCAAC CCGTTCAAGA GCGTTTACCA GTTGGGGCTG CGCACCGGCA TGATGCCTGA AGGCGCCGAA GGCCTGCTGG ACATGGCCAA GAGCTGGTCG GGCAAGCTGA TCGCATGGGA CCCGGTCAAG CAGGCGCCGG CGTGGGAGGT GCCGTACATC ACCATCTTCA ACGGTGGCAC CCTGAGCACT GGCGGCAACC TGGTGTTCGA GGGTAGCGCC GACGGCCGGG TGATCGCCTA CGCCGCCGAT TCGGGCAAAA AGCTCTGGGA GTCGCCCGCC GCCAGCGGCG TGATGGCTGC GCCGATCACC TATTCGGTGG ACGGCGAGCA GTACGTGACG TTCATGGCCG GCTGGGGCGG GGCGTTTTCT ACCTTTGCCG GGGCGCTGTC ATTGCGTGCG GGCGTGCAGC CGTTCGCCCA GGTGCTGACC TACAAGATCG GCGGTACCGC CAAGTTGCGT GAGCCGGCGC CACCGGCCGA TGCACCGGAG CCGCCCGCGT TGACCGCCGA TGCGCAAACG GTCGCTGCCG GGGCAGCCCT GTATGACGGC AACTGCTCGC AATGCCACGG TATCCACGCC GTCAGTGGTG GTGTGCTGCC CGACCTGCGC AAGCTCACTG CCGAAAAGCA CCAGATGTTC CTCGGCATCC TCTATGGCGG GCGCGTACCC GATGGCATGC CTTCGTTCGC CGACAACCTC AAACCCGAGC AGGTCGAGCA GGTGCACCAG TACCTGATCA AGCGCGCCCA TGACTTGAAG GCCGAAGGCG ATGCCTGGCA GCGGTTCAGC GCCAAGCCCG TCGCCCAGCC GCCACTGGCC GATAACACAC CACAGGAGTG A
|
Protein sequence | MNRTGPHRRP LPHLLSCLAL SLACSAPAFA AEVDGQRIIE ADKEPGNWMS HGRTYDEQRY SPLKAINQGN VNQLGLAWSY KLDLDRGVEA TPIVVDGVMY TTGPFSVVYA LDARNGTLLW KYDPQSDRHR AGEACCDAVN RGVAVWQGKV YVGVLDGRLE AIDAKTGKRV WSVDTRDDDK RSYTITGAPR VVNGKVIIGN GGAEFGVRGY VTAYDAETGK QAWRFFTVPG DPKLPPENKA MEIASKTWHG DAYVEWGGGG TAWDSFAYDP ELNLLYIGVG NGSMWDPKWR SQAKGDNLFL SSIVAVNADT GEYVWHYQTT PGDAWDFTAT QHMILAELPI DGKPRKVLMQ APKNGFFYVL DRATGELLSA KNIVPVNWAK GIDMKTGRPI FDDEAAAYWK DGKRKLVTPA FWGAHDWHPM SYNPDTGLVY IPAHIMSAYY EHIPEAPKRN PFKSVYQLGL RTGMMPEGAE GLLDMAKSWS GKLIAWDPVK QAPAWEVPYI TIFNGGTLST GGNLVFEGSA DGRVIAYAAD SGKKLWESPA ASGVMAAPIT YSVDGEQYVT FMAGWGGAFS TFAGALSLRA GVQPFAQVLT YKIGGTAKLR EPAPPADAPE PPALTADAQT VAAGAALYDG NCSQCHGIHA VSGGVLPDLR KLTAEKHQMF LGILYGGRVP DGMPSFADNL KPEQVEQVHQ YLIKRAHDLK AEGDAWQRFS AKPVAQPPLA DNTPQE
|
| |