| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2694 |
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| Symbol | |
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| ID | 6111645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2982319 |
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| End bp | 2984232 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622481 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001749555 |
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| Protein GI | 170721867 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0777971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC ACACCGCCTC ACCCCAAGCC AGTGAGCTGG CCGCGTTCGT CGATTGCCAT
TTCGCCGAAC GCGGCCTGAT ACCCGAACCT GTGATCGCCG AGTCTTGGTA CCGCAGCATC
AACCAGCATC ACCTGGACCC TGAACTACGC CACGTCGACA ACATCCTCAG CGCCACCGAA
ATCCGCCAGC ACCAGGCCCA GCATGAGGCC TACCTGGCCA TCGCCAGCCA GGGTGTCAGC
GGCCTGGCGC GGCGCGTAGT GGATGCAGGT TTCGCCGTGC TGCTCAGCGA CGCCGACGGC
ATTACCCTCG ATGCCCGCTT GCCGGCCGAC CCGCAGCGCT ATACGCGCTC CGGCCTGATT
GTCGGGGCGC GCTGGGACGA GTCGATAGCA GGCACCAATG GCATCGGCAC CGCTCTGGCT
TGCGGGCAGG CCCTGACCAT ACACCGGCAG GAGCACTTCC TGGCAGCCAA CGCCCGCCTG
AGCTGCTCGG TGTCGCCAAT CTTCGATGCC CATAATCAAC TGCTCGGTTG CCTGAATGCC
ACCTGCCTGT ACAACGACGG TCCCAAGCAA GCACAACACC TGACCTTGCA ACTGGTGACC
CTATACGCCC GGCTGATCGA GAACAGCCAT TTCCGCGAGC GCTACCGCGA CCGCCTGACC
CTGGCGCTGA AACCGCGTGA CGAGTTCTCG GACCTGGCGG CCGAGCAGTT GCTGGCGCTG
GATGAAGGTG GCCGGGTGAT CGGAGCCAAT CGGGCGGCCT TCCTTGCGCA CACCGGCAAA
TTGCTGGGGG CGCCTGTCGA GCAACTGCTG CACGCCGATA TCGACCAATT GCTCGACCTC
ACCCGTGGCG GCGCCCGAGG TACACAGCTG CGCGGCCAAG CTCAGCCGCT TTTGCTGGAC
GTCGGCCTGC GCGTCCCTGC CGGCTACCGC CTGCTGCGGG CTACACCGCC GATGCCCGCC
CGGGCTGGCC ACCCCGGCCT CGAACAACTG GCAGGCCAGG ACGTGCAACT GCAACAGGAC
GTGCGTCGGC TGCGCAAGGT GCTGGACAAG GACATCGCCA TCCTCCTCAA CGGCGAAACC
GGCACCGGCA AAGAAGCTTT CGCCCGCGCC CTGCACCAGG TCAGCCAGCG CCATGCCAAG
CCGTTCGTGG CACTCAATTG CGCAGCGATA CCCGAGTCAT TGATCGAGAG CGAACTGTTC
GGCTACCGCG CCGGTAGTTT CACGGGTGCC AGCCGCAAGG GCATGAAGGG CAAACTGGAG
CAAGCCAATG GCGGCACGCT GTTTCTCGAT GAAATCGGTG ATATGCCTGC ACACCTGCAA
ACGCGGCTGC TACGGGTGCT GGCTGAACGT GAACTGGTGC CACTGGGGGC AGAAACGCCA
GTGCTGCTGG ATATACAGGT GATATCGGCG ACGCATCAGG ACCTGCAGGC CATGATTGGC
GAAAAGCGCT TTCGCGAAGA CCTTTATTAT CGCCTGTGCG GGATGCGCAT GAGGTTACCG
GCCCTGCGTG AGCGCAGCGA CCGCCGCGAG CTGATCGATG CGCTGCTCTC TGGCTTGTCG
GCCGGGTCGG GGTTGCGTTT GAGCGCCGAA GCGCATCGTT GCCTGCTGGG CCATGCGTGG
CCGGGAAATG TGCGCCAACT GCTCAACGCC CTGCGCCAGG CGGTAGCGCT GGCCGAGGGC
GGTGTGATCG AACTGGCCGA CTTGCCCCGG GAGTTGCTGG ACAGTGCAGC GCCTGCGCAG
CCTGCAGCGC TCGAGCAGCA GGTGGAAGAC CTTCAGATGC GGCATTTGCT GGAGGTCTTG
AAGCGTGAGC GCTGGAACAT GAGCGCTGCG GCGCAGGCGT TGGGCATTTC GCGCTCGACG
CTTTACCGCA AGATGAAGCG CTACGGGATC GTGCAGCCGA ACCTGTTGGG GTGA
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| Protein sequence | MAAHTASPQA SELAAFVDCH FAERGLIPEP VIAESWYRSI NQHHLDPELR HVDNILSATE
IRQHQAQHEA YLAIASQGVS GLARRVVDAG FAVLLSDADG ITLDARLPAD PQRYTRSGLI
VGARWDESIA GTNGIGTALA CGQALTIHRQ EHFLAANARL SCSVSPIFDA HNQLLGCLNA
TCLYNDGPKQ AQHLTLQLVT LYARLIENSH FRERYRDRLT LALKPRDEFS DLAAEQLLAL
DEGGRVIGAN RAAFLAHTGK LLGAPVEQLL HADIDQLLDL TRGGARGTQL RGQAQPLLLD
VGLRVPAGYR LLRATPPMPA RAGHPGLEQL AGQDVQLQQD VRRLRKVLDK DIAILLNGET
GTGKEAFARA LHQVSQRHAK PFVALNCAAI PESLIESELF GYRAGSFTGA SRKGMKGKLE
QANGGTLFLD EIGDMPAHLQ TRLLRVLAER ELVPLGAETP VLLDIQVISA THQDLQAMIG
EKRFREDLYY RLCGMRMRLP ALRERSDRRE LIDALLSGLS AGSGLRLSAE AHRCLLGHAW
PGNVRQLLNA LRQAVALAEG GVIELADLPR ELLDSAAPAQ PAALEQQVED LQMRHLLEVL
KRERWNMSAA AQALGISRST LYRKMKRYGI VQPNLLG
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