Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2599 |
Symbol | |
ID | 6111550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2883297 |
End bp | 2884244 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641622388 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001749462 |
Protein GI | 170721774 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.39443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCA CCACACAACC GCGCCCCCCT GCGAACCCGC TGGCCACGCT GTGCGAGGTA ATCGGCGCAC ACGCGCCCAC AGCTGGCGAC TTCACGACAC ACATCGCAGA CCTCAGCGTC TACCGGCGTA ACGCGCCGGC CCCACCGATT ACCTGTATCG TCGAGCCGAG TATCGTGCTG GTGGTGCAGG GCGCAAAGGA AATGGTCATC GGTAGCGAGG TCTTCCCCTA CGACACGAGC CGCTTTCTGG TCACCTCGCT GAACATCCCC GCTAACTCGG CGGTGACGAT GGCCAGTGAG CAAGCCCCTT GCCTCGGCCT GGTGTTCAAG CTCGACCTGC GCACACTGGC GGAACTGATC GCACAAGATG GTCGTCTTGC GGTGAGTGGT CAGACCTTTC ACACCAGCGC TGGGGTGGGT GAATTGAGCC CGAAGTTACT GGAGAGCTTC AGCCGCCTGA TCGAGCTGCT CGAGGAGCCC GATGCGATAC CTGTGCTCTG GCCACTCATT CAGCGGGAAA TCCACTACCG TTTGCTGCTG AGTGACCAGG CCCCCCTCCT GCGCTACATC GCCTCCGTGG GCAGCAAGGG CCACCGAATC GCCAAGGCCA TCGACTGGAT GAAGCTGAAC TACGCCGCGC CGCTGCGAGT GGACGAGCTG GCCTCCCAAG TGCAGATGGG ACTCTCGACC TTCCACCAGC ATTTCCGCCA GCTGACCGCT ATGAGCCCGC TGCAATACCA GAAATGGCTG AGGTTGAACG AGGCGAAACG GTTGATGCTC AACGAGCATC TGGATGCCGC CACCGCTGCC TTCAAGGTCG GCTATGAAAG CCCCTCGCAG TTCAGCCGCG AGTACGGGCG CCAGTTCGGC ACACCGCCAA AGCGCGATAT CGCAGAACTG CGCCTGAGCG CGGAAAGATC AGCTGCCTCC ACACCCAGCG TGCCCTGA
|
Protein sequence | MPATTQPRPP ANPLATLCEV IGAHAPTAGD FTTHIADLSV YRRNAPAPPI TCIVEPSIVL VVQGAKEMVI GSEVFPYDTS RFLVTSLNIP ANSAVTMASE QAPCLGLVFK LDLRTLAELI AQDGRLAVSG QTFHTSAGVG ELSPKLLESF SRLIELLEEP DAIPVLWPLI QREIHYRLLL SDQAPLLRYI ASVGSKGHRI AKAIDWMKLN YAAPLRVDEL ASQVQMGLST FHQHFRQLTA MSPLQYQKWL RLNEAKRLML NEHLDAATAA FKVGYESPSQ FSREYGRQFG TPPKRDIAEL RLSAERSAAS TPSVP
|
| |