Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2481 |
Symbol | |
ID | 6111434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2755422 |
End bp | 2756417 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622276 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001749350 |
Protein GI | 170721662 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.25538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCCCG ATATTCGCCT GCTGATCCTG CCCTTGCCGG ATTTCGCGTT GCTGCCCTTC GGCGCATTTC TCGACAAGCT GCGTTTCAGC GCCGATGACG AAGATTACAG TCGCCAGCGC TACTGCAGCT GGACACTTGG CGGGCTGACC GGGGAGCCTG TGGTTTCCAG CAGCGGCGCG GTGGTGCAGG TGGAGGCTAT TACCGATTCG CTGGCGCTGA AGGGTTTCGA TTACCTGGTG CTGTTCGGCA GCCGCAACGC GCAGGCCACT GCCGGGTTGG CTCCTCGCTA TAAAAGCCTG CTCAGGCGCG CGGCCAAAGC TGGTGTGAAA CTGGTCGCCA TCGACAACGC GGTTTTCCTG CTGGCGGCCT GCGGTTTGCT GGAGGGGCAC AGGGTGGTTG TGCACTGGCG TCACGAAACC GAGTTCCGGG CAACGTTCCC GCACCTTCAG GTACTGCGCG AGCAGCTGTA CTGCATCGAT GGGGCCCGTA TTACCTGCGC CGGTGGCACG GCAGCCATCG ACCTGGCGGT GGCGCTGCTG TCAGAGGCCT GTGGCCGCGC TCGCGCGCTC AAGGGGTTGG CCGACATGCT GGTGGATGAG ACCCGTGACA GCCGCCATGC CCTGCGCTCG CTGGAGGCCG GCGCAGGGCA GGGGCGCCAG GTGCAGCGCG CGCTGGCGTT GATGCGCCAC CACATGGGGG CGCGCCTGTC CATCGAGCGA TTGGCGGCAG AGCTGGCTAT CAGCCGACGG CAACTGGACC GCCAGTTCCA GGCCAGCCAT GGTATGAGCG CCAAGGCCTG GTGGCTGGAA ATGCGCCTGC AACAGGCCCG CTGGCGCCTG TGCAACTCCA GCCATGGCCT GGCGCAGATT GCCGAGGAGG TAGGGTTTGC AGATGCCAGT TACCTGGGCA GGCGCGTACG ACAGCGCTTT GGTTGCACCG CGCAGGCGCT GCGCAAGGGG GCTCACTGCG GCGTGCCGAA CAACCCTGTC CAATAG
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Protein sequence | MVPDIRLLIL PLPDFALLPF GAFLDKLRFS ADDEDYSRQR YCSWTLGGLT GEPVVSSSGA VVQVEAITDS LALKGFDYLV LFGSRNAQAT AGLAPRYKSL LRRAAKAGVK LVAIDNAVFL LAACGLLEGH RVVVHWRHET EFRATFPHLQ VLREQLYCID GARITCAGGT AAIDLAVALL SEACGRARAL KGLADMLVDE TRDSRHALRS LEAGAGQGRQ VQRALALMRH HMGARLSIER LAAELAISRR QLDRQFQASH GMSAKAWWLE MRLQQARWRL CNSSHGLAQI AEEVGFADAS YLGRRVRQRF GCTAQALRKG AHCGVPNNPV Q
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