| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2463 |
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| Symbol | |
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| ID | 6111416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2741311 |
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| End bp | 2743101 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622258 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001749332 |
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| Protein GI | 170721644 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG CAGTCGATCA CAGCGTTTCG GCCTCATCGC CGGCAAGCCG GCTCCCACAG
GCTCAGCGCA CGCCTGAACA TTGCTCTGAA CCTGTAGTAG CCGGCTTGCC GGCGATAGCG
CCAGTACAGG CTCCGCCAGC CTCAAGCTAC CCCCGCGATC TCATGGCCCA GGCCCGCCTG
CAAGCCAGCG GCGAGCGCCT GCTCAATTGC CTCGAACGCC TCGCCTGCGA CACCCCCGAC
ACCTTCATCC GCCGCCTGGG CAGCACCCTG CATTACCCGG TACTGGACAG CCAGAGCCTG
TTGGCCAGCA CCCCTCGTTT CGACAAAATC AGCCTGGCCC AATGCCTGAA GCGTGAGTTC
GTGCTGATAG AGCAGGGCGG TGAACTGCTG GGTGTGTTCG CCGACCCCTT CGACCACGCC
CGCCTGGCCT GGATCGACGA TGTGCTGCAA GGCGCGCCTT TGTACCTGGC CCACGCCGCT
GACCTTGCCA CCTTCCTGGC CCGCCACGAA GAAAGCTTTC ACGCCGTCGA TGCCCTAGAT
CACGATGCCG AAGCCAGCAG CGAAAGCGAC CCGCTGCAAC GGCTGTCGCT GACCAGCATC
AGCGAAGACC AGAGCAAGGT GGTCAAGCTG GTCAACTCAA CCCTTTACGA CGCCCTCAAG
CAGCACGCCA GCGATATTCA CCTGGGCATG ACCGGCCAGG GCCTGACCAT CAAATACCGC
ATCGACGGCG TGCTCAACGC GGCCGGCAAG GCCAGTGGCA GCGCCTTCGC CGACCAGGTG
ATTTCGCGCA TCAAGGTCAT GGCCGAGCTG GATATCGGTG AAAAGCGCGT GCCCCAGGAT
GGCCGCTTCA AGGTTGCCGT AGGCGAGCGC CAGATCGACT TCCGGGTGTC GATCATGCCC
AGCATCTTCG GTGAAGACGC GGTGCTGCGG GTGCTCGACA AACAGGACCT GTCCGACCGT
GTCAGCGGCG TGCAGCTGCA GGCCCTGGGC TTTGCCGATG AAACCCTGCG TGCCTTGCGC
CGCCTGGCAG CCGAGCCCTA CGGCATGATC CTGGTCACCG GCCCCACCGG CAGCGGCAAG
ACCACAACCC TGTACGCCAT GATCAGCGAG ATCAACCACG GTGTGGACAA GATCATCACC
ATCGAAGACC CGGTCGAGTA CCAGTTGCCC GGTGTGCTGC AGATCCCGGT CAACGAGAAG
AAGGGCTTGA CCTTCGCCCG TGGCCTGCGC TCGATCTTGC GCCACGACCC TGACAAGATC
CTGGTCGGCG AAATCCGCGA CCCCGATACC GCGCAGATCG CCGTGCAGTC GGCACTCACC
GGCCACCTGG TGTTCACCAC CATCCACGCC AACAACGTTT TCGATGTGAT CGGCCGCTTC
AGCCAGATGC AGGTCGACCC CTACAGCTTC GTCTCCGCCC TCAACGCCGT GCTGGCCCAA
CGCCTGATCC GCCTGGCCTG CCCGCATTGC TGCACGCCGT GCGAGGCCGA TGACGAAATT
CTGGCCGCCT CCGGCCTTAC CCGTGAAGGC GTGCAGGGCT GGACGTTCGT CCGCGCCCAG
GGCTGTGGCC AGTGCCGCGG CAGTGGCTAC CGCGGCCGCA GCGCCATCGC CGAACTGCTG
CACCTGGACG ACGACCTGCG GCAAATGATC GTCGAAAGAC GCCCGCTGGC GCAGATCAAG
GCGCTGGCTT GCCAACGCGG CCTGCGCCTG CTGCGCGCAT CCGCCCTGGA CCTGGTCCGC
GAGGGCCGTA CCACGCTTGA GGAGATCAAC CGTGTCACAT TCATTGCGTG A
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| Protein sequence | MSNAVDHSVS ASSPASRLPQ AQRTPEHCSE PVVAGLPAIA PVQAPPASSY PRDLMAQARL
QASGERLLNC LERLACDTPD TFIRRLGSTL HYPVLDSQSL LASTPRFDKI SLAQCLKREF
VLIEQGGELL GVFADPFDHA RLAWIDDVLQ GAPLYLAHAA DLATFLARHE ESFHAVDALD
HDAEASSESD PLQRLSLTSI SEDQSKVVKL VNSTLYDALK QHASDIHLGM TGQGLTIKYR
IDGVLNAAGK ASGSAFADQV ISRIKVMAEL DIGEKRVPQD GRFKVAVGER QIDFRVSIMP
SIFGEDAVLR VLDKQDLSDR VSGVQLQALG FADETLRALR RLAAEPYGMI LVTGPTGSGK
TTTLYAMISE INHGVDKIIT IEDPVEYQLP GVLQIPVNEK KGLTFARGLR SILRHDPDKI
LVGEIRDPDT AQIAVQSALT GHLVFTTIHA NNVFDVIGRF SQMQVDPYSF VSALNAVLAQ
RLIRLACPHC CTPCEADDEI LAASGLTREG VQGWTFVRAQ GCGQCRGSGY RGRSAIAELL
HLDDDLRQMI VERRPLAQIK ALACQRGLRL LRASALDLVR EGRTTLEEIN RVTFIA
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