| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2430 |
|---|
| Symbol | |
|---|
| ID | 6111383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2699370 |
|---|
| End bp | 2700275 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641622225 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001749299 |
|---|
| Protein GI | 170721611 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA AGCAACTGCG CGCCTTCGTC GCCGTGGCCA AGTACCAAAG TTTTGCCCAG
GCCGGCGAAC ACCTGCATGT ATCACAACCG GCGTTGAGCC TGACCATCAA GGCCCTGGAG
GACAACCTTG GCGGCGCCCT GCTCACCCGC ACCACGCGCA GCGTCAGCCT GACGGCCGAA
GGTGAGGTCC TGCTGCCACT GGCCCGGCGC CTGCTGGCCG ACTGGGACGA CACCGAGGAA
ATGCTGCGCC AGCGCTTCAC CCTGCAATTG GGGCGGGTGT CGGTGGCGGC CATGCCGGCT
TTTGCCGGCA ACCTGCTGCC CCGTTCACTC AAGGTGTTTC GCCAACGTTA CCCGAAGGTC
AACGTCACGG TGCACGACGT GATCAACGAG CAGGTCCTTG AACTGGTGCG CCACCGCCGC
GTCGAACTGG GCATCGGCTT CGAACCGGAA AACACCGACG GCCTGCGCTT CCACCCGCTG
TACCTGGACC GCTTCGTTGC TGTGGTGCCC ACCGATTCCC CGTTGGCCGA GCTGGCCGAA
GTCAGCTGGG CGCAGTTGCT GGCCGAAGAT TTCATCGCCC TGCAGCGCCC TTCGGCCGTG
CGCCTGCTGC TGGAGCAGAA CGTAGCGGCA CTGCACGGCA AGCTCGCGGT GGCGTTTGAA
AGCCACCAGC TCTCGACCAT TGGCCGCATG GTCGCCAGTG GGCTGGGCGT GAGCGCGGTG
CCGGCGCTGT GCATCAACCA GATGCAGGAG CTTGGCGCGC GTTGCATTAC CCTGGTAGAG
CCCGCTGTAG AACGGCGGAT CGGCGTCATC GCCTTGAGCG ACCATAAACT TTCCACTGCA
GCGCAGGCGC TGCTTGAGGT ACTGCTTTCC CACACACAGA TTCCGGAGGT GACATGCGTT
ACATGA
|
|---|
| Protein sequence | MNVKQLRAFV AVAKYQSFAQ AGEHLHVSQP ALSLTIKALE DNLGGALLTR TTRSVSLTAE
GEVLLPLARR LLADWDDTEE MLRQRFTLQL GRVSVAAMPA FAGNLLPRSL KVFRQRYPKV
NVTVHDVINE QVLELVRHRR VELGIGFEPE NTDGLRFHPL YLDRFVAVVP TDSPLAELAE
VSWAQLLAED FIALQRPSAV RLLLEQNVAA LHGKLAVAFE SHQLSTIGRM VASGLGVSAV
PALCINQMQE LGARCITLVE PAVERRIGVI ALSDHKLSTA AQALLEVLLS HTQIPEVTCV
T
|
|---|
| |