Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2375 |
Symbol | |
ID | 6111328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2645966 |
End bp | 2647021 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641622170 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001749244 |
Protein GI | 170721556 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.229949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TCGCAGGGCA ACTTGACCCT CCCCTGTTAC CCGTCGACCA GCCTCGGGTA GTGGTTTTCG TTGCCTACCC CGCCATGGGC CTGCTCGACC TCAGCGGCGC GCAAACCGTG TTCTGGGCAG CCACCAAGGC CATGGCCGAG CGCGGTCTGC CCGGCTACCG CCTACATACC GCCAGCCTCG ACGGTGGCCT CCAGCCAACC GCCGAAGGCC TGGTGGTGGC CACCGAGCGC CTGGATGACG CCATGGCCCA GGCCGTCGAC ACACTGATCG TACCCGGCGC GCCGGACATC ATCCGTAGCC TTCCCCAGCA CGGCCCACTG GTGGCCTGGC TGCGCCGCGC CAGCCTGCAC GCCAGGCGTA CGGCGTCTGT CTGCAGCGGC ACTTTCCTGC TGGCCAGCGC CGGCCTGCTC GACGGCCGGC GCGCTGCCAC CCACTGGGCC ATGTGCGAGG CGTTGCGCCG TGACTTCCCG GCCGTGCAGG TGGACCACGA ATCGATCTTC GTTCAGCAAG GCACCGTGTG GACCTCGGCG GGTGTGAGTG CAGGGATCGA CCTGGCCCTG GCGCTGGTCG AAATGGACTG CGGCCGCGAC GTCGCGATGC AGGTGGCGCG CGAACTGGTG GTGTTTCTCA AGCGCCCGGG CGGCCAGGCG CAGTTCAGCG AATTGCTCAA GCTGCAAGGC CAGCAGAGCG CGGAGTTCGA AGCCCTGCAC CTGTGGCTCA ATGAGCACTT GGGCGACCCA CGCCTGAGCG TCGAGCGCCT GGCCGAACAG GCGCATATGA GCCTGCGCAA TTTCACCCGG GTGTACAAAC TGAAGACCGG CCGCACACCG GCCAAGGCGA TCGAGGTGTT CCGCCTGGAA GCGGCCCGGC GCCAGCTGGA AAACACCGAT AGCCACATCG AGCAGGTCGC CCGCCTGTGC GGCTTCGGTA GCGAAGAACG CATGCGCCTG GCCTTCCAAC GCCACCTGGC TGTCACCCCG CGCGACTACC GTGCACGCTT CGCCCGCAGC GTGCCGCTGG CCGAAATTCA GGGTTCTTTG GCCTAG
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Protein sequence | MTDIAGQLDP PLLPVDQPRV VVFVAYPAMG LLDLSGAQTV FWAATKAMAE RGLPGYRLHT ASLDGGLQPT AEGLVVATER LDDAMAQAVD TLIVPGAPDI IRSLPQHGPL VAWLRRASLH ARRTASVCSG TFLLASAGLL DGRRAATHWA MCEALRRDFP AVQVDHESIF VQQGTVWTSA GVSAGIDLAL ALVEMDCGRD VAMQVARELV VFLKRPGGQA QFSELLKLQG QQSAEFEALH LWLNEHLGDP RLSVERLAEQ AHMSLRNFTR VYKLKTGRTP AKAIEVFRLE AARRQLENTD SHIEQVARLC GFGSEERMRL AFQRHLAVTP RDYRARFARS VPLAEIQGSL A
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