Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2243 |
Symbol | |
ID | 6111196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2496115 |
End bp | 2496984 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641622038 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001749112 |
Protein GI | 170721424 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGG AACAACTGAT AACTTTTGCC ACCGTTGCCG AGCATGGCAA CATCAGCCAT GCGGCGTTGG CCTTGCATCT GTCGCAGCCG GCTGTCTCCG GCCAGCTCAA GCTGCTGCAG GACGCATTCG GCGAGCCCCT TTACCAGCGT GCCGGCCGCG GAGTGCGGCT TACTGCGGCC GGCGAGCAGC TGTTGGCCCA TGCCGAACGC CTGCGCGAAA CCTTTCGCCA GGCCCAGGCA CTGCGCGACG CCATGCGCGG GCTGGAGCGC GGCACCTTGC GCATCGGTGC CAGCACTACG CCCGCCAGCT ACCTGCTGCC TTACCTGATC GCCGACTTCC ATGCGCAATA CCCCGAGGTG CAGGTGAGCA CCTTGCACGG CAATACCGCA GAGATCGTCT CGGCGCTGGG CAGTGTGGAC ATCGCCCTGA TCGAAGGCCC GCCCGGGCAG GAATTGCCGC TGGGCACGGG TGTCACACCG TGGCGTGAGG ACGAAATCGT CGCCATCGTG CCAAGCGCTC ACCCGTTGGC CAATCAGGCG GGTCAGACGC TGGAAGCCTT GGGCAGCTAT CCCTTGGTAC TGCGTGAAAG CGGCTCCGGG GTTCGGCAGA TCGTTGAACG GGCATTTGCG CGCAGTGGCG TGGCCATGCG CGTAGCGTTG GAAATTGCCG GCGTCGAAGG GGTGAAGGAG GCCGTGCGGG CGGGGATGGG CATTGGCTTC GTTTCGGCGA TGTCGATCAG GCATGAAGGG GGCGCACTGC AGCGATTGCA CATCGCCCCG CAGCCGTTGG TCAGGCACTT TTCCATTCTG CTGCCGCATG CGGCCACGCC CTCGCGGGCG GCGGCGCGGT TCATGGCATT GTGTACATGA
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Protein sequence | MTPEQLITFA TVAEHGNISH AALALHLSQP AVSGQLKLLQ DAFGEPLYQR AGRGVRLTAA GEQLLAHAER LRETFRQAQA LRDAMRGLER GTLRIGASTT PASYLLPYLI ADFHAQYPEV QVSTLHGNTA EIVSALGSVD IALIEGPPGQ ELPLGTGVTP WREDEIVAIV PSAHPLANQA GQTLEALGSY PLVLRESGSG VRQIVERAFA RSGVAMRVAL EIAGVEGVKE AVRAGMGIGF VSAMSIRHEG GALQRLHIAP QPLVRHFSIL LPHAATPSRA AARFMALCT
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