| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2239 |
|---|
| Symbol | pssA |
|---|
| ID | 6111192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2490838 |
|---|
| End bp | 2492166 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641622034 |
|---|
| Product | phosphatidylserine synthase |
|---|
| Protein accession | YP_001749108 |
|---|
| Protein GI | 170721420 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACCCCG AATCCATGCT GGCCGCGCTG CCAGGTTTCG CCATCGCGCC GCAGGCCATC
CAGGTTTTGC CCGATGCCGC GGCCTATCGC ACCTGCTTGC TTGAGCGCAT CGGCGCTGCG
ACCCGGCGTA TTGTCATCGT CGCCTTGTAC TTGCAGGAGG ACGAGGCCGG GCAGGAAGTG
CTGGATGCCC TGTACCAGGC CAAGGCGGCG CGGCCGGGCC TGGAGATCGT CATCGTGGTC
GACTGGTTTC GCGCACGCCG TGGCCTGCTG GGCGCCGGGC GCCAGCCGGG CAATGCCGCC
TGGTACCAGG CCCAGCGTCA GCTGCGTGGG TTGGACGTGG TTATTCATGG CGTGCCAGTG
CAAACCCGTG AGTTGTTCGG CGTGCTGCAC CTCAAGGGCA GCGTGATCGA CGACTGCGTG
ATCTATACCG GCGCCAGCCT GAACAACGTC TACCTGCACC GTTTCGACCG TTATCGCCTG
GACCGTTACC ACCTGTTCCA GTCGCCTGAG CTGGCCGATG CCATGGTCGC CCTGGTGCGG
CGGCTGCTGC ACCACACTGC AACGCCGCGC CTGGACCTGC CGGCGCCACC GACCAACCGC
AGCCTGCGCG GCGATATTCG CCGCTTGCGT GCACGGCTGC GGCGCATGGC GTATGACGCA
CCGGCTGCCG TTGCAGGGCA GGGCCTGCGG GTGGTGCCGT TGCTCGGCGT TGGCCGTGGC
AACCCGCTTA ACCGCGCGGT GTGCGCGTTG CTGGCTGCGG CGCGGTCACA GATCATCATC
AGCACGCCTT ATTTCAACCC GCCCCGAGTG GTGATGCGCG AGATCGACCA CGCCCTGGAC
CGCGGCGTGC GGGTGGAACT GATTGTCGGC CACCGTACGG CCAATGATTT CTATATCGCG
CCCGGTGAGC CGTTCAGCGC CAGTGGCGCG TTGCCCTATC TGTATGAGGA TAACTTGCGC
GCCTTTGCCC GGCGCCGCCA TGCCAGCATT GTCAGCGGCC AACTGGTGGT TCGGATCTGG
AACGACCCTG GGCATACCTT TCATGCCAAA GGCGTCTGGG TCGATCAGCG TTACTCGTTG
CTGACAGGCA ACAACCTCAA TCCGCGCGGG TTCAACCTGG ACCTGGAGAA CGGGCTGCTG
ATCGACGACC CGCAGGGCGA ATGGACGGTG CCGCGGGAAG TGGAACTGGA GGGCATTCGC
CGGTTTGCAC CGAAGATCGG CTCGGCCCAA GAATTGGGCG TCAAGGCGGA GCACCCCAAA
GAAGTGCGCA GGTTCTTGCG CCGCTTGCGT TTCAGTCGCC TGGAGCCGTT GATCAAGCGG
GTGTTGTGA
|
|---|
| Protein sequence | MNPESMLAAL PGFAIAPQAI QVLPDAAAYR TCLLERIGAA TRRIVIVALY LQEDEAGQEV
LDALYQAKAA RPGLEIVIVV DWFRARRGLL GAGRQPGNAA WYQAQRQLRG LDVVIHGVPV
QTRELFGVLH LKGSVIDDCV IYTGASLNNV YLHRFDRYRL DRYHLFQSPE LADAMVALVR
RLLHHTATPR LDLPAPPTNR SLRGDIRRLR ARLRRMAYDA PAAVAGQGLR VVPLLGVGRG
NPLNRAVCAL LAAARSQIII STPYFNPPRV VMREIDHALD RGVRVELIVG HRTANDFYIA
PGEPFSASGA LPYLYEDNLR AFARRRHASI VSGQLVVRIW NDPGHTFHAK GVWVDQRYSL
LTGNNLNPRG FNLDLENGLL IDDPQGEWTV PREVELEGIR RFAPKIGSAQ ELGVKAEHPK
EVRRFLRRLR FSRLEPLIKR VL
|
|---|
| |