| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2214 |
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| Symbol | |
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| ID | 6111167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2461589 |
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| End bp | 2462998 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622009 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001749083 |
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| Protein GI | 170721395 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.369206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.387035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAA CATCCACAAC CACCACCGCG AACAGCGGGC ATGAGAGCAA ACTCAGTGCC
TCGCTGAAGT CGCGCCACCT GACGATGATG TCGATCGCCG GGGTTATCGG CGGCGCCTTG
TTCGTCGGCT CCGGCAGCGT GATCCACAGC GCCGGCCCGG CTGCTGTCCT GGCCTACCTG
GCAGGCGGCA TCCTGGTGGT ACTGATCATG CGCATGCTGG GTGAAATGGC GACTTCTTCG
CCCGACACCG GTTCGTTTTC CACCTACGCC GACCGCGCCA TCGGCCGTTG GGCCGGTTTC
ACCATCGGCT GGCTGTACTG GTGGTACTGG GTCATCCTCA TGGCCTGGGA AGCTTATGTG
GCGGGCAAGA TCCTGCATGG TTTCTTCCCT GATGTGAGCG TCAACGTGTT CGTGCTGGCC
ACGACCCTGG TGCTGATCAC CGTCAACTTC TTCAACGTCA AGCACTACGG CGAGTTCGAG
TTCTGGTTCG CGTTGATCAA GGTGATCGCG ATCGTCTGTT TCCTGATCGT GTGTACCGCT
GCGGTGATGA ACATTTGGCA GTTCGGTGAA GTGCGCGGCA TCACCCACCT GACCGCCGAA
GGCTTCATGC CCAATGGCAT CACCACGGTG ATCGGTGCGT TGCTTGGTGT GATGTTCGCC
TTCCTCGGTG CCGAAATCGT CACCATCGCC GCGTCCGAAG CCAAGGACCC GGCCACTCAG
ATCGTCAAGG CCACCAACTC TGTGGTGTGG CGTGTATGCC TGTTCTATGT CGGCTCGATC
TTCCTGATCG TCTGCCTGGT GCCGTGGAAC GACCCGCACC TGGGCGTTTC CGGTTATGGC
GCCTATCGCC GCACCTTGGA ACTGCTGGGT GTGCCGTATG CCGAGCTGTT GATGAACTTC
GTGGTGCTGA CGTCGGTGAG CAGCTGCCTG ATCTCGGGCC ACTACACCGC TTCGCGCATG
CTGTTCTCGC TGGCACAGCG TGGCGATGCG CCGTCGTTCT TCAAGACGAC ACGCGCCGGC
ACCGGCGTAC CGGTGAACGC GATTATCGGT TCGTGCGCCG TGGCCGTGGT GTGCGCGCTG
ATCAACTTCA GCGAGACCCT GCGCCCGAAA GACGTGCTCG ATACGCTGAT GAACACCACC
GGCATGATCG CTTTGCTGGT GTACCTGGTG ATTGCCTTCT CGCAGCTGCG CATGCGCCGC
AAGCTGATCG CCGAGGGCAA GGAAGTACGC CTGAAGATGT GGCTGTTCCC GTGGCTGACC
TACCTGGTGA TCGCCTTCAT CGTCGCCGCA CTGGTAACCA TGGCCTTCAT GCCTGACTAC
CAGATCCTGG TGATCTCCAC CGGCATTGCT GCGGCCATCG TGGTGGCCAT GGGTGTGGTG
CACCAGATGC GCAGCGCCCG CAAGCACTAA
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| Protein sequence | MDATSTTTTA NSGHESKLSA SLKSRHLTMM SIAGVIGGAL FVGSGSVIHS AGPAAVLAYL
AGGILVVLIM RMLGEMATSS PDTGSFSTYA DRAIGRWAGF TIGWLYWWYW VILMAWEAYV
AGKILHGFFP DVSVNVFVLA TTLVLITVNF FNVKHYGEFE FWFALIKVIA IVCFLIVCTA
AVMNIWQFGE VRGITHLTAE GFMPNGITTV IGALLGVMFA FLGAEIVTIA ASEAKDPATQ
IVKATNSVVW RVCLFYVGSI FLIVCLVPWN DPHLGVSGYG AYRRTLELLG VPYAELLMNF
VVLTSVSSCL ISGHYTASRM LFSLAQRGDA PSFFKTTRAG TGVPVNAIIG SCAVAVVCAL
INFSETLRPK DVLDTLMNTT GMIALLVYLV IAFSQLRMRR KLIAEGKEVR LKMWLFPWLT
YLVIAFIVAA LVTMAFMPDY QILVISTGIA AAIVVAMGVV HQMRSARKH
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