| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2041 |
|---|
| Symbol | |
|---|
| ID | 6110994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2272141 |
|---|
| End bp | 2273451 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641621836 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001748910 |
|---|
| Protein GI | 170721222 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG CGATCAAGGC CTGCCTGGCC GCTGCCTGCC TCAGCCTGCC GCTATTGGCC
CAGGGCGCAG AGACATTGAC CATCGCCACG GTCAACAACA ACGACATGAT CCGCATGCAG
CGCCTGGCCA AGGTGTTCGA AGAGCAACAC CCGGACATCA GGCTCAAGTG GGTCGTGCTT
GAAGAAAACG TGCTGCGCCA GCGCCTGACT ACCGACATCG CCACCCAGGG CGGGCAGTTC
GACGTACTGA CCATCGGCAT GTACGAAGCC GCGCTGTGGG GCGCCAAAGG CTGGCTGGAG
CCGATGACGG ACCTGCCGGC CGATTACAAC CTCGACGACG TGTTCCCGTC TGTGCGCAAT
GGCTTGTCGG CCAACGGCAC GCTGTACGCC TTGCCCTTCT ATGCCGAAGC CTCCATCACC
TACTACCGCA AGGACCTGTT CCAGAACGCA GGGCTGAACA TGCCCGAGCA ACCGACCTGG
ACCCAGCTGG GTGAATATGC CGCCAAACTT CACCACCCCG ACCAGGGCCA GTACGGCATC
TGCCTGCGCG GCAAGGCCGG CTGGGGCGAG AACATGGCGC TGATCGGCAC CGTGGCCAAT
GCCTTTGGCG CACGCTGGTT CAACGAACAG TGGCAGCCGG AATTCACCGG CAGCGCGTGG
AAGAACGCGC TGAACTTCTA CGTCGACACC TTGAAGCAGT ACGGCCCGCC AGGCGCGTCG
AGCAACGGCT TCAACGAAAA CCTGGCACTG TTCAACAGCG GCAAGTGCGC GATGTGGGTC
GATGCCAGCG TTGCCGGCTC GTTCGTCACC GACAAGACCC AGAGCAAGGT CGCCGACCAG
GTCGGCTTCA CATTTGCGCC AAAAGAGGTC ACCGACAAGG GCGCCTCGTG GCTGTATTCC
TGGGCGCTGG CCATCCCCAG CAGCTCCAAG GCCAAGGACG CGGCAAAGGC CTTCAGCACC
TGGGCCACGT CCGAAGCCTA CGCCAAGCTG GTGGCCGACA AGGAAGGCGT GGCCAACGTG
CCACCCGGCA CCCGCGCCTC TACCTACAGC GACGCCTACC TGGCCGCAGC GCCGTTCGCC
AAGGTGACGC TGGAGTCGCT CAAGCGCGTT GACCCCAACC ACCCCACGCT CAAGCCCGTG
CCGTACGTGG GTATTCAGTT GGTGACCATC CCCGAGTTCC AGGCCATTGG TACGCAGGTC
GGCAAGCTGT TCTCCGCCGC CCTGACCGGG CAGATGAAGG TCGACCAGGT ACTTGCCGCC
GCCCAGCAAT CCACCGAACG CGAGATGAAG CGCGCCGGTT ATCCCAAGTA G
|
|---|
| Protein sequence | MNDAIKACLA AACLSLPLLA QGAETLTIAT VNNNDMIRMQ RLAKVFEEQH PDIRLKWVVL
EENVLRQRLT TDIATQGGQF DVLTIGMYEA ALWGAKGWLE PMTDLPADYN LDDVFPSVRN
GLSANGTLYA LPFYAEASIT YYRKDLFQNA GLNMPEQPTW TQLGEYAAKL HHPDQGQYGI
CLRGKAGWGE NMALIGTVAN AFGARWFNEQ WQPEFTGSAW KNALNFYVDT LKQYGPPGAS
SNGFNENLAL FNSGKCAMWV DASVAGSFVT DKTQSKVADQ VGFTFAPKEV TDKGASWLYS
WALAIPSSSK AKDAAKAFST WATSEAYAKL VADKEGVANV PPGTRASTYS DAYLAAAPFA
KVTLESLKRV DPNHPTLKPV PYVGIQLVTI PEFQAIGTQV GKLFSAALTG QMKVDQVLAA
AQQSTEREMK RAGYPK
|
|---|
| |