| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2001 |
|---|
| Symbol | |
|---|
| ID | 6110954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2233408 |
|---|
| End bp | 2234571 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641621796 |
|---|
| Product | SMC domain-containing protein |
|---|
| Protein accession | YP_001748870 |
|---|
| Protein GI | 170721182 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4637] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.433742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCA CCCTCGCCAT CGGCAACTAC CGCTCCATCA ACCACCTTGT GTTGCCTTTA
AGCCAACTCA ACCTGGTGAC CGGCGCCAAC GGCAGCGGCA AATCCAATCT GTACAAAGCC
CTGCGCCTGC TCGCCGAGAC CGCCCAGGGC GGCGTGATCG AAGCGCTTGC CCGCGAAGGC
GGGCTGGATT CGACCTGGTG GGCCGGGCCA GAGATGAGTG CGCGCATGAA GCGCGGTGAA
GTGCCCATCC AAGGCCAGCA TCCGAGCGAG GCCAAACGCC TGCGCCTGGG CTTCGCCACC
GAGGATTTCG GCTTTGCCAT CTCGCTGGGC TTGCCGATAC CCCTGCCCTA TCCCACCGCA
TTCATGCTCG ACCCCGAGAT CAAGTGCGAA GCCATCTGGG GCGCTGGGGC TTATCGCCCA
TCGTCCTTAT TGGTTGAGCG CAAGAACGCC ATGGTTCGTG CGCGGGAAGG CAATAGTTGG
ACGGTGCTCG ATCAACATGC CGACAGCTGC GAGAGCTTTT TCAACATCGT GGGCCGGCCA
CGGCAGGCGC CGGAGATTGG TGAGCTGCGA GCGTTCATCA ACAGCTGGCG CTTCTACGAT
CACTTCCGCA TCGACCGCGA CGCACCCTGC CGCCAACCGC AGCTGGGGAC GCGCTCGCCG
GTGCTGCATC ATGACGGGCG TAACCTTGCC TCGGCGTTGC AGACCATCAT CGAGATTGGC
GAGGTTGAAG ACCTGATAGC GGCACTGGAT GACGCGTTTC CCGGTAGCCG CTTGGAGATT
GATGCGCCGC CGGGTGGGCT GTTCAGCGTG CGGCTGCATC AGCATGGGCT GTTGCGCCCG
CTGGGTGGGG GTGAATTGTC GGATGGTACG TTGCGTTATC TGTTGTTGAT GGCTGCGTTG
CTGACGCCAC GGCCGCCGTC ACTGATGGTA CTTAACGAGC CGGAAACCAG CTTGCATGCC
GACCTGCTGC CTGCGCTGGC GCGGTTGATC ATTCGCGCTT CGCGGCGGAG CCAGGTTTGG
GTGGTGTCGC ACAGTGCGCC GCTGATTGAG GCGCTGTCGG CGTGTGACGG GTGCAATGTG
CTGGAGCTGG AGAAGGTTCA GGGGCAGACA CAGCTACGCG GGGTTGGGTT GCTGGATGAA
CCGCTGTGGC GGTGGGTTGA CTGA
|
|---|
| Protein sequence | MLTTLAIGNY RSINHLVLPL SQLNLVTGAN GSGKSNLYKA LRLLAETAQG GVIEALAREG
GLDSTWWAGP EMSARMKRGE VPIQGQHPSE AKRLRLGFAT EDFGFAISLG LPIPLPYPTA
FMLDPEIKCE AIWGAGAYRP SSLLVERKNA MVRAREGNSW TVLDQHADSC ESFFNIVGRP
RQAPEIGELR AFINSWRFYD HFRIDRDAPC RQPQLGTRSP VLHHDGRNLA SALQTIIEIG
EVEDLIAALD DAFPGSRLEI DAPPGGLFSV RLHQHGLLRP LGGGELSDGT LRYLLLMAAL
LTPRPPSLMV LNEPETSLHA DLLPALARLI IRASRRSQVW VVSHSAPLIE ALSACDGCNV
LELEKVQGQT QLRGVGLLDE PLWRWVD
|
|---|
| |