Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1987 |
Symbol | |
ID | 6110940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2214248 |
End bp | 2215540 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641621783 |
Product | outer membrane porin |
Protein accession | YP_001748857 |
Protein GI | 170721169 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.6739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGA CTACCAATAA GAACAATCAG AGGTATTTCT TCATGTTGAG CACCTATAAA GGCCTGCTCA TGGCCACCGT TGTGCCTTTT GCCTGCTCCA GCATGGCCAG TGGTTTCATC AATGACAGCA AGGGTAGCCT GACCCTCGAA AACTATTACT TCGATCGGGA TTACCGTGAG GGGCCAGGTC AATCCCAGAC CCAGGAATGG GCACAGGGAT TGGTTCTGGA CATGCGTTCG GGATTTACCG AAGGCCCCGT CGGTTTTGGC GTCGATGCGC TTGGTCAGCT GGGTTTCAAA TTGGATTCCG GTCCGGGGCG CAGCGGCATA GGCTTGCTCA GCGTGGATGC TGAAACCGGT GAGCCGGGGG AGAGCTATGG AAAATTCGAC GTGCTGGGCA AGGCCCGTCT GTCGAAGACT CAATTCGAAC TCGGTACGAA GCAGGTGCTC GCGCCCGTGG CTCGCGGCAT GAACGTGCGA CTTTTCCCAC CATTGATGCG TGGCGCATTC CTGACTTCCC GTGAGATAGA CGACCTCACG CTTCAGGTGA CGCGTATCGA CGCGATTAAA CTGCGTAACT CGACCAATCA TGAGCCGATG TCGATCAGCA GTCCGTATCG TCGCTTCAAT GGCTCTGCCA CCAGCGACCA ATTCGACATC CTTGGCGTCG ACTACCAATG GAATGCGGGC CTGGCCACCA GTTACTACCA TGCAACGCTG CAGGATCTAT ACCGGCAGGA CTACATCAGC CTCCTGCATA CATGGGCGCT GCCGCAAGCA AAGCTGGTCA GCGACCTGCG CTATTTCATC AGCAGGGAAG ACGGCGCAGG TGAAGCCGGC CCGGTGGACA ACCGCACCTT CAGCAGCATG TTCACGCTCA GTACCCAGGG ACATTCCATC GGTCTAGGCT ACATGGCACT TAGCGGGGCC ACCGCCATGC CCTACGTTGC CGGTACCAGC CCATACGTGA ACACCGGCGG CTCGCAGGTC AGCGAGTTCG TCAACCCCGG CGAGAAGACC TGGCAGTTCA GGTACGACTA CGATTTTGTC GCGCTAGGCG TGCCAGGGCT GAAATTCATG TGGCGTTACA TGGATGGTCG GCAGCTCAAA CTGCCCATCG CCAAGTTCGA GGCCGAAGAG TCGGAGCGCG ATGTCGAGCT CAGCTACGTC ATCCAGAGCG GCAGTCTTAG GAACCTTGGC ATTCGCCTGC GCAATGCCGA CTACCGCGCC GACTTCACCC GTGAAATCGA CGAGACACGG GTGCAGATCG ACTATACCTT GGCGCTCTGG TGA
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Protein sequence | MPATTNKNNQ RYFFMLSTYK GLLMATVVPF ACSSMASGFI NDSKGSLTLE NYYFDRDYRE GPGQSQTQEW AQGLVLDMRS GFTEGPVGFG VDALGQLGFK LDSGPGRSGI GLLSVDAETG EPGESYGKFD VLGKARLSKT QFELGTKQVL APVARGMNVR LFPPLMRGAF LTSREIDDLT LQVTRIDAIK LRNSTNHEPM SISSPYRRFN GSATSDQFDI LGVDYQWNAG LATSYYHATL QDLYRQDYIS LLHTWALPQA KLVSDLRYFI SREDGAGEAG PVDNRTFSSM FTLSTQGHSI GLGYMALSGA TAMPYVAGTS PYVNTGGSQV SEFVNPGEKT WQFRYDYDFV ALGVPGLKFM WRYMDGRQLK LPIAKFEAEE SERDVELSYV IQSGSLRNLG IRLRNADYRA DFTREIDETR VQIDYTLALW
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