Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1967 |
Symbol | thrS |
ID | 6110920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2193910 |
End bp | 2195832 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641621764 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001748839 |
Protein GI | 170721151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0134711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0132251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTA TTACTCTTCC CGATGGCAGT CAACGCGCGT TTGATCACGC GGTATCCGTA GCCGATGTCG CCGCTTCGAT CGGTGCCGGC CTGGCCAAGG CCACCGTTGC CGGCAAAGTC GACGGCAAGC TGGTCGACGC CTGCGAGCTG ATCACCCACG ACGCCACCCT GCAGATCATC ACCCCTAAAG ATGAAGAGGG ACTGGAGATC ATTCGTCACT CGTGCGCCCA CCTGGTCGGC CACGCGGTGA AACAGCTGTA CCCGACCGCC AAGATGGTCA TCGGCCCGGT CATCGACGAA GGCTTCTATT ACGACATCGC CTACGAGCGC TCCTTCACCC CTGAAGACCT GGCCGCCATC GAAAAGCGCA TGCAGCAGCT GATCGAAAAA GACTACGACG TCATCAAGAA GATGACCCCG CGTGCCGAAG TCATCGACGT GTTCAAGGCC CGTGGCGAAG ACTACAAGCT GCGCCTGGTC GAAGACATGC CCGACGAGCA GGCCATGGGC CTGTACTACC ACGAAGAATA CGTCGACATG TGCCGTGGCC CGCACGTGCC GAACACCCGC TTCCTCAAGG CATTCAAGCT GACCAAGCTG TCCGGCGCCT ACTGGCGTGG CGATGCCAAG AACGAGCAGC TGCAGCGCGT GTACGGTACC GCCTGGGCTG ACAAGAAGCA GCTGGCTGCC TACATCCAGC GTATCGAAGA AGCCGAAAAA CGCGACCACC GCAAGATCGG CAAGCAGCTC GACCTGTTCC ACCTGCAGGA AGAAGCGCCG GGCATGGTGT TCTGGCACGC CAACGGCTGG ACCGTCTACC AGGTGCTCGA GCAGTACATG CGCCAGGTCC AGCGCGAAAA CGGCTACTCG GAAATCAAGA CCCCGCAAGT CGTCGACCGC ATCCTCTGGG AACGTTCCGG CCACTGGTCC AACTACGCCG AAAACATGTT CACCACATCG TCGGAAAGCC GCGATTACGC GGTCAAGCCG ATGAACTGCC CGTGCCACGT GCAGGTGTTC AACCAGGGCC TGAAGTCGTA CCGCGACCTG CCACTGCGCC TGGCCGAATT CGGTGCCTGC CACCGTAACG AGCCGTCCGG CGCCCTGCAC GGCATCATGC GCGTGCGTGG CTTCGTGCAA GACGACGCGC ACATCTTCTG CACCGAAGAC CAGGTGAAGA AAGAAGCCGC CGACTTCATC AAACTGACTC TGGATGTGTA CAAGGACTTC GGTTTCACCG ACGTCGCCAT GAAGCTCTCC ACCCGCCCCG CCAAGCGCGT GGGTTCCGAA GAGCTGTGGG ACCGCGCCGA AGGTGCACTG GCCGACGCCC TGAACGAATC CGGCCTGGAA TGGGAATACC AGCCAGGTGA AGGTGCCTTC TACGGCCCGA AAATCGAATT CACCCTGCGC GACTGCCTGG GCCGTAACTG GCAGTGTGGT ACCCTGCAGT ACGATCCGAA CCTGCCAGAG CGCCTGGACG CCAGCTACAT CGCCGAAGAC AACGCGCGCA AGCGCCCGGT GATGCTGCAC CGCGCCATCC TCGGCTCGTT CGAACGCTTC ATCGGCATGC TCATCGAGCA CTATGCCGGT GTGTTCCCGG CGTGGCTGGC ACCGACCCAG GCCGTGATCA TGAACATCAC CGACAAACAG GCCGATTTCG CCCTTCAGGT TGAGAAATCT CTGAACGGTA GCGGTTTCCG TGCCAAGTCG GACTTGAGAA ATGAGAAGAT CGGCTTTAAA ATCCGCGAGC ATACTTTGCT CAAGGTCCCG TACCTTTTGG TTATAGGGGA CCGCGAAGTC GAAACGCAAA CCGTCGCTGT GCGTACTCGC GAAGGTGCAG ACCTGGGCTC CATGCCCGTC GCCCAGTTCG TTGAGCTTCT GACACATGCG GTTTCCCGGC GTGGTCGCCA AGAATCGGAG TAA
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Protein sequence | MPTITLPDGS QRAFDHAVSV ADVAASIGAG LAKATVAGKV DGKLVDACEL ITHDATLQII TPKDEEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDE GFYYDIAYER SFTPEDLAAI EKRMQQLIEK DYDVIKKMTP RAEVIDVFKA RGEDYKLRLV EDMPDEQAMG LYYHEEYVDM CRGPHVPNTR FLKAFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK RDHRKIGKQL DLFHLQEEAP GMVFWHANGW TVYQVLEQYM RQVQRENGYS EIKTPQVVDR ILWERSGHWS NYAENMFTTS SESRDYAVKP MNCPCHVQVF NQGLKSYRDL PLRLAEFGAC HRNEPSGALH GIMRVRGFVQ DDAHIFCTED QVKKEAADFI KLTLDVYKDF GFTDVAMKLS TRPAKRVGSE ELWDRAEGAL ADALNESGLE WEYQPGEGAF YGPKIEFTLR DCLGRNWQCG TLQYDPNLPE RLDASYIAED NARKRPVMLH RAILGSFERF IGMLIEHYAG VFPAWLAPTQ AVIMNITDKQ ADFALQVEKS LNGSGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV ETQTVAVRTR EGADLGSMPV AQFVELLTHA VSRRGRQESE
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