| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1965 |
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| Symbol | |
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| ID | 6110918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2192900 |
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| End bp | 2193112 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641621762 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001748837 |
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| Protein GI | 170721149 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000020659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0130883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAATC GCCAACAAGG CACCGTCAAA TGGTTCAATG ATGAGAAAGG CTACGGCTTC
ATCACCCCAG CAGGCGGCGG CGACGACCTG TTCGTTCACT TCAAAGCCAT CGAATCCGAC
GGCTTCAAGA GCCTGAAAGA AGGCCAGACT GTTTCCTTCG TTGCCGAAAA AGGCCAGAAG
GGTATGCAGG CTGCGCAGGT TCGTCCGGAG TAA
|
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| Protein sequence | MSNRQQGTVK WFNDEKGYGF ITPAGGGDDL FVHFKAIESD GFKSLKEGQT VSFVAEKGQK
GMQAAQVRPE
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