| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1961 |
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| Symbol | |
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| ID | 6110914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2190437 |
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| End bp | 2190835 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621758 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_001748833 |
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| Protein GI | 170721145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00175028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0489349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCGCGCTGCT CAACATTGCC CTGTCGCGCA CCATTGCCGG GCTTGGCCAT
GGCGATATCC TGGTGATCGG CGATGCCGGT TTGCCCGTGC CGCCAGGGGT CGAACTGATC
GACCTGGCCT TGACGCCGGG CATTCCCGAC TTCGCCAGCG TGCTGCGCGC AGTGCTAAGC
GAGATGCAGG TAGAGCGCCA TGTGCTGGCC GAAGAGATGC AGAAGGTCGT GCCGCCCGGC
CTGGTCGAGA TCGAGCGTCT GCGCGGCAAG CTCGGCAAGC GTGAATGGCT GAGCCATGAG
CAATTCAAGG TGTTGTCGCG CAGTGCCCGC GCCGTGGTGC GTACCGGCGA GTGCCAGCCC
TACAGCAATA TCGCCCTCAT AGCTGGCGTA ACCTTCTAG
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| Protein sequence | MKKTALLNIA LSRTIAGLGH GDILVIGDAG LPVPPGVELI DLALTPGIPD FASVLRAVLS
EMQVERHVLA EEMQKVVPPG LVEIERLRGK LGKREWLSHE QFKVLSRSAR AVVRTGECQP
YSNIALIAGV TF
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