Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1915 |
Symbol | |
ID | 6110866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2145603 |
End bp | 2146286 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621710 |
Product | GntR domain-containing protein |
Protein accession | YP_001748787 |
Protein GI | 170721099 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.249377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA CCCTACCCCG CGCCGTCCCC GAACAGGCCC TGCAAGGCAT CCGCAAATTG ATCGAAGACG GCGGCTATCA GCCCGGTGAT GCCCTGCCCT CGCAGCGCGA CCTTGCCGAG CAGCTGGGGG TCAGCAGAGC CTCTCTGCGA GAAGCGCTCT CCTCCCTAAG CGCTTTAGGA TTGGTGAGCG TGCAGCCGGG CAAGGGTGTG TTCGTGCAAG CGCCAACGCC TTCGGCATTT GCCTGGCCCT ATGCCGAACA GGTCTCTGCA AGCGACACCT TCCAGCTGCG TTACGCCTTG GAGGGTTTCG CCGCTGGGCA GGCGGCACTG GCACTGACTG CGGACGACAT CGATCGCCTG GAAGTGAATG TAGAGGCGAT GCATCAGGAG TTGCGCGCGG GCCGCTTCGA AGCCGCCGCA CGGCTGGATT TCGCCTTTCA CCAGCAATTG CTGCAAGCCT GCGGCAACCA AGCCATGCTG CAGGTGATCA CCGCCAGCCA GGAGATTTTC CTGGAAAGCC AGAAGCTGCC CTTCATCCGC CCGGAACGGG CGATGGAAAC CTGGCAGGAA CACCGCAAAA TTCTGCGCGC CCTGGCTCGC CGCTCACAGT CGGCGGCGCA GAAGGCGATG CAGGAGCATA TTCGCAACGC GGCTTCGCGA ACCGGGGTGG TTTTTTCGGT GTAA
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Protein sequence | MLDTLPRAVP EQALQGIRKL IEDGGYQPGD ALPSQRDLAE QLGVSRASLR EALSSLSALG LVSVQPGKGV FVQAPTPSAF AWPYAEQVSA SDTFQLRYAL EGFAAGQAAL ALTADDIDRL EVNVEAMHQE LRAGRFEAAA RLDFAFHQQL LQACGNQAML QVITASQEIF LESQKLPFIR PERAMETWQE HRKILRALAR RSQSAAQKAM QEHIRNAASR TGVVFSV
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