Gene PputW619_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1895 
Symbol 
ID6110846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2123878 
End bp2124711 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID641621690 
ProductAraC family transcriptional regulator 
Protein accessionYP_001748767 
Protein GI170721079 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CCCTGCGCGA ACAGACCCAC CTTTGGCAGG CGCCCGCGCT GGGCGATGTC 
GAGATGCTGC ATGCGCGCTA CATTCAGCAA CGCTTCGCCC CACATGTTCA CGAGGGTTAC
GTGTTCACCG TGATCGAGTC GGGTGCCCAG CGCTTCTGGC ACCGCGGCAG CGAGCACCTG
GCACCCGTGG GCAGCATGGT GCTGATCAAC CCGGACGAAC TGCATACCGG CGCTACAGCC
CATGAGGCTG GCTGGCGCTA CCGCGGGTTT TATCCGGAGC ATGAACGGGT GACCGGCGTG
CTCGACGAGC TGGAACTGGG CCGCCACGGC ATGCCCTGCT TCAAGGACAG CGTGATCCAG
GACCCGGCCC TGGCCATCGC CTTCAGCAAG CTGCATCGGC TGTCCGAAGC CAGCGCCAGT
GCCCTGCAGC AACAGACCGC CTGGCGCCAG GCGGTTCTGG CCTTGGTACA ACGACACGGC
CAATGCGCTG AACCCGCGCC CCCTGGCCAC GAACCACTGG CCGTAGCCCG CGCCCGCGAG
CTGCTGGAGA GCCAACTGGC AGAACCGCCT TCGCTCGAAG CACTGGCAGG CGCGGTTAAT
CTATCGCCGT TCCATTTCGC CCGGGTGTTC CGCCAGGCCA CCGGCCTGCC GCCGCATGCC
TGGCTGAAGC AACGGCGCCT GGCCCGTGCC CGGGAAATGC TCAAGAGCGG CGTGACTGCA
ACCGGCGTGG CTTTCAACCT GGGCTTCGCT GACCAGAGCC ACCTCAGCCG GCAATTCAAA
CAGGCCTATG GCGTGACCCC GGGCGCCTAT CGCACCGCCT GCCTGCACGG GTAA
 
Protein sequence
MSTPLREQTH LWQAPALGDV EMLHARYIQQ RFAPHVHEGY VFTVIESGAQ RFWHRGSEHL 
APVGSMVLIN PDELHTGATA HEAGWRYRGF YPEHERVTGV LDELELGRHG MPCFKDSVIQ
DPALAIAFSK LHRLSEASAS ALQQQTAWRQ AVLALVQRHG QCAEPAPPGH EPLAVARARE
LLESQLAEPP SLEALAGAVN LSPFHFARVF RQATGLPPHA WLKQRRLARA REMLKSGVTA
TGVAFNLGFA DQSHLSRQFK QAYGVTPGAY RTACLHG