Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1846 |
Symbol | |
ID | 6110797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2064758 |
End bp | 2065309 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641621641 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001748718 |
Protein GI | 170721030 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.677123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00632075 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGAAG ACGCCCAGGG CCTGGCCCTG CTGATTCGTG GCCTGCGCAA GCACCGCGGG CTGACGCTCG GCGAGTTGGC GATCAAGGTC AAGCGCTCGC TGGGCTTTCT CTCCCAGGTC GAACGCGGCC TGTCGCAGCC GACCGTAGCC GACCTCACTG CGATCAGCGA GGCGCTGCAC GTACCCACCA CCTATTTCTA CCAAGCCAGC CAGCCGCGCG AACTCGACTG GGTCACCCGC CCCGGTGAAA GGCGCACGAT CTACTACGCC GAAGGCATCA GCGATGTGCT GGTCTCGCCG ACCCTCAACG GCAGCTTTGC CATGCTCGAA AGCCACCTGG CGCCCGGCGC CAGCAGTGGC GAGGGGCATC TGGACGACAG CGCCGAACAA GGCGGTTTCG TCCTTGAAGG CGCGCTGACC CTATGGCTGG ATGGCCACCC GGACGCCGTC ACACTCGGCC CCAATGACAG CTTCCAGCTC CCTGCGCACA GTCATTTCCG CTACGCCAAC CTGACCGACC AGACGACCCG TGTCCTCTGG GTATTCCGAT GA
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Protein sequence | MSEDAQGLAL LIRGLRKHRG LTLGELAIKV KRSLGFLSQV ERGLSQPTVA DLTAISEALH VPTTYFYQAS QPRELDWVTR PGERRTIYYA EGISDVLVSP TLNGSFAMLE SHLAPGASSG EGHLDDSAEQ GGFVLEGALT LWLDGHPDAV TLGPNDSFQL PAHSHFRYAN LTDQTTRVLW VFR
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