Gene PputW619_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1846 
Symbol 
ID6110797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2064758 
End bp2065309 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID641621641 
ProductXRE family transcriptional regulator 
Protein accessionYP_001748718 
Protein GI170721030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.677123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00632075 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAG ACGCCCAGGG CCTGGCCCTG CTGATTCGTG GCCTGCGCAA GCACCGCGGG 
CTGACGCTCG GCGAGTTGGC GATCAAGGTC AAGCGCTCGC TGGGCTTTCT CTCCCAGGTC
GAACGCGGCC TGTCGCAGCC GACCGTAGCC GACCTCACTG CGATCAGCGA GGCGCTGCAC
GTACCCACCA CCTATTTCTA CCAAGCCAGC CAGCCGCGCG AACTCGACTG GGTCACCCGC
CCCGGTGAAA GGCGCACGAT CTACTACGCC GAAGGCATCA GCGATGTGCT GGTCTCGCCG
ACCCTCAACG GCAGCTTTGC CATGCTCGAA AGCCACCTGG CGCCCGGCGC CAGCAGTGGC
GAGGGGCATC TGGACGACAG CGCCGAACAA GGCGGTTTCG TCCTTGAAGG CGCGCTGACC
CTATGGCTGG ATGGCCACCC GGACGCCGTC ACACTCGGCC CCAATGACAG CTTCCAGCTC
CCTGCGCACA GTCATTTCCG CTACGCCAAC CTGACCGACC AGACGACCCG TGTCCTCTGG
GTATTCCGAT GA
 
Protein sequence
MSEDAQGLAL LIRGLRKHRG LTLGELAIKV KRSLGFLSQV ERGLSQPTVA DLTAISEALH 
VPTTYFYQAS QPRELDWVTR PGERRTIYYA EGISDVLVSP TLNGSFAMLE SHLAPGASSG
EGHLDDSAEQ GGFVLEGALT LWLDGHPDAV TLGPNDSFQL PAHSHFRYAN LTDQTTRVLW
VFR