Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1839 |
Symbol | |
ID | 6110790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2058036 |
End bp | 2059001 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641621634 |
Product | ribonuclease Z |
Protein accession | YP_001748711 |
Protein GI | 170721023 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.885199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0537997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACCTGC TGTTTCTGGG CACCTCGGCC GGGGTGCCCA CCAAGGCGCG CAACGTCAGT GCCACCGCCG TGATCGAAGC CAGCGGCAGC CACTGGTACC TGGTCGATTG CGGCGAAGGT ACGCAGCATC AACTGCTGCA TACCCCATTG TCGGTCCGCG ACCTGCGCGC CATTTTCATC ACCCATGTAC ACGGCGACCA TTGCTTCGGC CTGCCGGGCC TGCTGGCCAG CGCCGGCATG AGCGGGCGCA CGGCGCCGCT GGACCTGGTG CTGCCGGCCG CCTTGCACGA CTGGGTGCGC CTGAGCCTGG CCGCCAGTGA TTCCTTCCTG CCGTTCGAGC TGCGTTTGCT GGCGGTCGAG CAGCTGGGCG AATGGCGAAG CGATACGCTT GCGGTCAGCA CCGTACAGCT GTCGCACCGG GTGCCCAGCG TTGCTTTCGT GTTCACCGAG CTGAACCCCG AGCCGCGCCT TGACGTGCAG CGCCTGGATG CCGAAGGTAT CCCGCGTGGC CCGCTGTGGG GCGAGCTTGC CAAGGGCCTG ACGGTAGAAC ACGCGGGGCG AATGCTGCAT GGCCGGGACT ACCTGCGCGC CTCGCGGCCG GCACGGCGGG TGATCGTCTG CGGCGACAAC GACAACCCCG AGCTGTTGGC AGAGGCGGCG AAAGACGTTG ATGTGCTGGT GCACGAAGCG ACATTCACAC AACCGATCAT CGCCCGCACA GGTGTGAGCT TCGGCCACAG CAGTGCGGCA GCGGTGGCGC GCTTTGCCGA AACGGCCGGT GTGCGCAACC TGGTGCTGAC GCACTTCAGT GCCCGCTATC AGCCGGACCC TCGGCGCAGC CCGTGCATTG ACGAGGTAAG GGAAGAGGCG CAGGTCCATT ACAGCGGCAA CCTGACCCTG GCCCAGGACC TGCAGCGTTA CCACATCGGG CGCGATGGGT GCCTGGGCCG CGTCACGGGT ATCTAG
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Protein sequence | MDLLFLGTSA GVPTKARNVS ATAVIEASGS HWYLVDCGEG TQHQLLHTPL SVRDLRAIFI THVHGDHCFG LPGLLASAGM SGRTAPLDLV LPAALHDWVR LSLAASDSFL PFELRLLAVE QLGEWRSDTL AVSTVQLSHR VPSVAFVFTE LNPEPRLDVQ RLDAEGIPRG PLWGELAKGL TVEHAGRMLH GRDYLRASRP ARRVIVCGDN DNPELLAEAA KDVDVLVHEA TFTQPIIART GVSFGHSSAA AVARFAETAG VRNLVLTHFS ARYQPDPRRS PCIDEVREEA QVHYSGNLTL AQDLQRYHIG RDGCLGRVTG I
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