Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1837 |
Symbol | |
ID | 6110788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2055163 |
End bp | 2056665 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641621632 |
Product | permease for cytosine/purines uracil thiamine allantoin |
Protein accession | YP_001748709 |
Protein GI | 170721021 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.524757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0916284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA GCAGATCGCA AGTGATCGAG CAGGATGGCC TGTTCGAGCT GTCCGCAGGC AGTGACGTGC TCGACAGCCC GCGCTACAAC CACGACATCG CCCCCACAAA AGTGCACCAG CGCACCTGGA ACAAATGGCA CATCACCGCA TTGTGGGTGG GCATGTCCAT CTGCGTGCCT ACCTACACCC TGGGCGGCGT GCTCACGGCC TACTTTGGCC TGAGCGTGGG CGAGGCGCTG CTGGCGATCC TGCTGGCCAA CCTCATCGTG CTGATCCCGC TCACCCTCAA CGCCTTCCCA GGCACCAAGT ACGGCATTCC CTTCCCTGTG TTGCTGCGTT CATCGTTCGG TATCTTCGGC TCCAACGTGC CGTGCCTGAT ACGCGCGGTG GTTGCCTGTG GCTGGTTCGG TATCCAGACG ATGTTCGGCG GCTTGGCCAT TCACCTGTTC CTGGGCTCGA TCTTCGATGA CTGGAAAGCG CTGGGTGGCA CGGGCGAAGT GATCGGTTTC ATGGTGTTCT GGGCCCTTAA CCTGTGGGTG GTGTTGCGCG GCGCAGAATC TATCAAATGG CTCGAAACCT TGTCGGCGCC GCTGTTGGTG GCAGTCGGCT TTGGCCTGTT GTTCTGGGCG TTGCCGCACA TGTCGATGAC CGAGCTGCTG GCCCAGCCAC CCAAGCGCCC GGAAGGGGCG AGCGTAGTGA GTTATTTCTG CGCCGGGCTG ACTGCGATGG TCGGCTTCTG GGCCACGCTG TCACTGAACA TTCCGGATTT CAGCCGCTAC GCCAAGAGCC AGAAAGACCA GATTCTCGGG CAGATCTTCG GCCTGCCACT GACCATGTTC CTGTTCGCCT CCCTGGGGGT GGTGATGACC GCCGCCTCGG CGTCGCTGGT AGGTGAAACG GTGTCCGACC CGGTGAGCCT GATCGGCAAG ATCCAGAGCC CGGGCTGGGT GGCACTGGCC ATGGCGTTGA TCGTCATCGC CACGCTGTCG ACCAACACTG CGGCCAACAT CGTTTCGCCG ACCAACGACT TCCAGAACAT TGCCCCGCGC CTGATCGGGC GCAGCCGCGC CGTGTGGCTG ACAGGCTTCA TCGGCCTGGC GCTGATGAGC CACGAGCTGC TGAAAAAACT CGGCTGGATC GTTTCCGACA TCAGCCTGGA GAGCGTCTAT TCCAACTGGC TGCTGGGGTA CTCCAGCCTG CTTGGGCCGA TTGCCGGGAT CATGGTGGTG GACTACTTCT TGATCCGTCG GCAGAAGCTG GATCTGGCCG GCCTGTACCG TGATGACATC TATCCGGCCT GGAACTGGGC AGGGTTTGCC GCCTTTGCGC TGCCTGTGGC ACTGACCGTG ATGGCCATTG GTAACAGCAG TTTCAGCTGG TTCTACGACT ATGGCTGGTT CACCGGGTCG CTGCTTGGCG GGGTGCTGTA CTACGCCCTG GGCGGCTTGG CGGTGCGTGG GCCAGTGCAG CCTGTGATCA ATGCAGACAA CAAAAACGCC TGA
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Protein sequence | MQQSRSQVIE QDGLFELSAG SDVLDSPRYN HDIAPTKVHQ RTWNKWHITA LWVGMSICVP TYTLGGVLTA YFGLSVGEAL LAILLANLIV LIPLTLNAFP GTKYGIPFPV LLRSSFGIFG SNVPCLIRAV VACGWFGIQT MFGGLAIHLF LGSIFDDWKA LGGTGEVIGF MVFWALNLWV VLRGAESIKW LETLSAPLLV AVGFGLLFWA LPHMSMTELL AQPPKRPEGA SVVSYFCAGL TAMVGFWATL SLNIPDFSRY AKSQKDQILG QIFGLPLTMF LFASLGVVMT AASASLVGET VSDPVSLIGK IQSPGWVALA MALIVIATLS TNTAANIVSP TNDFQNIAPR LIGRSRAVWL TGFIGLALMS HELLKKLGWI VSDISLESVY SNWLLGYSSL LGPIAGIMVV DYFLIRRQKL DLAGLYRDDI YPAWNWAGFA AFALPVALTV MAIGNSSFSW FYDYGWFTGS LLGGVLYYAL GGLAVRGPVQ PVINADNKNA
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