Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1778 |
Symbol | |
ID | 6110728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1977420 |
End bp | 1978610 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621573 |
Product | AcnD-accessory protein PrpF |
Protein accession | YP_001748651 |
Protein GI | 170720963 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.152698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00100052 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACACG CACCACAAAT CAAGATCCCC GCCACCTACA TCCGCGGCGG CACCAGCAAA GGCGTGTTCT TCCGCCTGCA AGACCTCCCT GAACCAGCTC AAGCCCCAGG GCCGGCCCGT GACGCACTGC TACTGCGGGT CATCGGCAGC CCTGACCCCT ATGCCAAGCA GATCGACGGC ATGGGTGGCG CCACTTCAAG CACCAGCAAA ACCGTGATCC TGTCGCAAAG CACCAGGCCC GACCACGACG TCGACTACCT GTTCGGCCAG GTAGCCATCG ACAAGGCCTT CGTCGACTGG AGCGGCAACT GCGGCAACCT GTCTGCTGCT GTCGGCTCGT TCGCCATCAG CAGTGGCTTG GTCGAGCCGT CGCGCATCCC GCGCAATGGC GTTGCCACCG TGCGTATCTG GCAGGCCAAT ATAGGCAAGA CCATCATCGC TCATGTGCCG ATCACCGAGG GCCAAGTGCA GGAAACCGGC GACTTCGAGC TCGACGGTGT GACGTTCCCG GCGGCAGAGG TGCAACTGGA ATTCCTTGAT CCGGCGGCCG ATGAGGGTGA AGGCGGCGGT GCGATGTTCC CTACCGGTAA CCTGGTGGAT GACCTGGAAG TGCCCGGTGT CGGTACCTTC AAAGCCACCT TGATCAACGC CGGTATCCCG ACCATTTTCG TCAATGCCTC CGATATCGGT TATGCCGGCA CCGAGCTGCA GGATGCGATC AACGGCGATG CGCAAGCGCT GACGCGTTTC GAGGCGATCC GTGCCCATGG CGCCGTGCGC ATGGGGCTGA TCGAACATGT CGACCAGGCG GCCGGGCGTC AGCACACGCC GAAGGTGGCT TTCGTTGCGC CGCCAAGCAC CTACACTGCG TCCAGTGGCA AGGCTGTCGA GGCGGCTGAC ATCGACCTGC TGGTGCGTGC ACTTTCCATG GGCAAGTTGC ACCACGCGAT GATGGGTACT GCTGCGGTGG CCATCGGTAC CGCTGCTGCC ATTCCAGGTA CGCTGGTCAA CCTCGCTGCT GGCGGGGGCG AGCGCAGTGC CGTGCGCTTC GGCCATCCCT CCGGCACCTT GCGGGTCGGG GCTCAGGCCA GCCAGGTGGA TGGCGAGTGG ACGGTCACCA AGGCAATCAT GAGTCGTAGT GCCCGGGTGT TGATGGAAGG CTGGGTAAGG GTGCCTGGCG ACAGCTTCTG A
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Protein sequence | MAHAPQIKIP ATYIRGGTSK GVFFRLQDLP EPAQAPGPAR DALLLRVIGS PDPYAKQIDG MGGATSSTSK TVILSQSTRP DHDVDYLFGQ VAIDKAFVDW SGNCGNLSAA VGSFAISSGL VEPSRIPRNG VATVRIWQAN IGKTIIAHVP ITEGQVQETG DFELDGVTFP AAEVQLEFLD PAADEGEGGG AMFPTGNLVD DLEVPGVGTF KATLINAGIP TIFVNASDIG YAGTELQDAI NGDAQALTRF EAIRAHGAVR MGLIEHVDQA AGRQHTPKVA FVAPPSTYTA SSGKAVEAAD IDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGERSAVRF GHPSGTLRVG AQASQVDGEW TVTKAIMSRS ARVLMEGWVR VPGDSF
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