Gene PputW619_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1733 
Symbol 
ID6110679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1929280 
End bp1930374 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID641621524 
ProductABC transporter related 
Protein accessionYP_001748606 
Protein GI170720918 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.657107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGG TGCTGGAACA GGTCAGCCGC AGCGTCGATA ACCAGCCCTG GATCATCGAC 
GCGTCCCTGC AGTTCGAGCC CGGCTCGTTC AACGTGCTGC TTGGCCGGAC CCTGGCCGGC
AAGACCAGCC TCATGCGCCT GATGGCCGGG CTCGACCGCC CCGACCGTGG CCGCGTGCTG
ATGGCGGGTG AAGATGTCAC TGGCGTGCCG GTGCGTCGGC GCAATGTGTC GATGGTGTAT
CAGCAGTTCA TCAACTACCC GACCCTGAGC GTTTACGAGA ACATCGCCTC ACCCTTGCGT
CAGGCGCGCA TGCCCGAGCC CCAAATCCGT CGACGCGTGC AGGAAACTGC CGAGATGCTG
CGCATCGAGC CCTACCTGCA ACGCTTGCCG CTGGAGCTGT CTGGCGGCCA GCAGCAGCGC
ACGGCGATGG CCAGGGCGCT GGTCAAGGAT GCCGGGTTGA TTCTGTTCGA TGAGCCGCTG
GTCAACCTCG ACTACAAGCT GCGCGAAGGG CTGCGCCAGG AGCTGCGCGA GTTGTTCGCC
GCGCGCAACT GCATTGCCGT GTATGCCACC ACCGAGCCCA ACGAAGCGCT GGCGCTGGGT
GGTACCACCA CCCTGGTGCA CGAGGGGCGA ATCGTCCAGA GCGGGCCTAC AGCAGAGGTC
TACCAGCGGC CCGGCAGCGT GCTGGCCGCC GAGCTGTTCA GCGAGCCGCC GATCAACCTG
ATACCGGGGC GTATCAGTGG CAATGAGGTG AGCCTGGCCC AGGCCGTGCA CTTCGCCCGC
AATGTCGACC TGCACCGCCT GGGCGACGGC GATTACCGCT TTGGCGTGCG CCCCAGCCAC
CTCACCCTGG TGCCGGCGCA CGATGACGAC CTGGAGCTGG CGGTGCGGGT GGAACTGGCC
GAGATCAGCG GTTCCGAGAC ATTCCTGCAC GTGCGTAACG AGCAGTGGCG GATGGTCCTG
CACCTGCCGG GGGTGCACGA GTATCAGGTG GATACGCCTA TCCGCGTCTT CATACCCACC
CACAAGCTGT TCGTCTTCGA CAGCGCCGGG GCACTGGTAC AGGCACCGGG CCTGCGCCAG
GCAAGGAGCG CCTGA
 
Protein sequence
MSLVLEQVSR SVDNQPWIID ASLQFEPGSF NVLLGRTLAG KTSLMRLMAG LDRPDRGRVL 
MAGEDVTGVP VRRRNVSMVY QQFINYPTLS VYENIASPLR QARMPEPQIR RRVQETAEML
RIEPYLQRLP LELSGGQQQR TAMARALVKD AGLILFDEPL VNLDYKLREG LRQELRELFA
ARNCIAVYAT TEPNEALALG GTTTLVHEGR IVQSGPTAEV YQRPGSVLAA ELFSEPPINL
IPGRISGNEV SLAQAVHFAR NVDLHRLGDG DYRFGVRPSH LTLVPAHDDD LELAVRVELA
EISGSETFLH VRNEQWRMVL HLPGVHEYQV DTPIRVFIPT HKLFVFDSAG ALVQAPGLRQ
ARSA