| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1732 |
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| Symbol | |
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| ID | 6110678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1927299 |
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| End bp | 1929056 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621523 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001748605 |
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| Protein GI | 170720917 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CCACTTCGAC CCATGCCCAA TTGATCCAGG CCTCCTGGGC GCGCTGCCGA
GATCACGGCC TGCAGCCACA AAGCGCCCCC GACTTCGATT GCCTGACCAG GGCCGAACTC
AGCGCCCTGC TGGAGCGGCG CCAGGCACTG TTGCAACACA CCCGCGATGC CGTGCTGCCG
CAGTACGCGC ACCTGCTGGG CAATGCCAGC TACCTGGTGA TGCTCGCCGA CGCCAGCGGC
TGCCTGCTCG AGACCTGGGG ATCGCGACGC TTCGTCTGCC CCCAGCACCA GCACGGTTTC
AGTGCCGGCG CCCACTGGCA CGAACGGGGC GTGGGCACCA ATGCGCTGGG CACCGCGCTG
GTCTGCGCCG AGCCCGTCCA TGTTGGCCAG GACGAACACT TCCTGCGCCA GAACCGCTAC
ATGGCCAGCG CCGCCGCCCC GCTGTACGAT GCCCAGCGGC AACTGGTCGG CGTGCTCGAC
GTGGCCAGCG ACGGCTACCT GCCAGCCACC CAGACCCTCG GCCTGGTGCG CATGATGGGC
CAGAGCCTGG AGAATCGCCT GATCCTTGCG CAGCATGCCG AGCAGCACGC GCAGTTGCTG
TTCAACAGCG CTTGCGACAA CCTCGACAGC CCTTGGGCCG GGCTGCTGGT ATTCGATGAG
CGTGGCCAGG TACTCGCCGC CAATCATCGA GCCGACAGCC TGCTGGGCGG CAACCCGCTG
CAGCAGAACG TCGAACAACT GTTCCAGATC CCCCTCTACC AGTTGCTTGC CCACCCCCAG
CAGCAACCAT TCGCCTTGCA GGCGGCCGGG CGCAACCGGT TCCACTGCCA GTGGCAAGCC
CCCTGGCAAA GCACCCCGCG CTCAATGCTT CACAGTGGCG ATCCACGCAT GGAAAAGGCC
TTGGGCCAGG CCAGCTTGAT GCTGGAAAAA GACATCCCGC TGCTGGTCCA GGGTGAAACC
GGCGTCGGCA AGGAAGTCTT CGTTCAGACC CTGCACCGCG CCAGCAGCCG TGCCCGCCAG
CCGTTGATCG CGGTCAACTG TGCGGCGATT CCGGCAGAAC TGGTGGAATC GGAGTTGTTC
GGTTATGACA AAGGCGCCTT CACCGGTGCT CATCACAAGG GCAACCCCGG GCTGATCCGC
AAGGCCGACA AGGGCGTCCT GTTCCTCGAC GAAATCGGCG ACATGCCGCT GCCGACCCAG
GCCCGCCTGC TGCGCGTGCT GCAATCGCGC AGCATTCAGC CACTGGGCAG CGGCGAACCG
GTAGCGGTGA ATATCCGCGT AGTCTCGGCA AGCAATCGGG ACCTGGCCGA AGAGGTACGT
GCAGGGCGCT TTCGCCAGGA TCTCTACTAC CGCATCGCCG CAATGGCGGT CGTGTTGCCG
GCGCTGCGCG AGCGCACTGA CCGGCGAGAA TTGATCGAGC ACATCCACGC ACGGTATCGC
GACCCTTACC AACCCCAGCG CTTGGGGCAG CCTATCCTTG AGCTGCTTGA TCGCCACCCC
TGGCCGGGCA ATCTGCGCGA GCTGGTGAGT GTGATGCAGG TGGCGCTGGC GTTGGCAGGC
GATGGACCGG TCGGCGTCGA ACATCTGCCC GCCGGCTTTC TGGCCGAAGC ACAAGGATGC
GCGGTGGTGA GCGACTGTAG TGACGATGAG GCGGACCTGC AAAGCCTGCT GAAACGGGCC
AATGGCAACC TCTCGGCCGT GGCGCGTGGC CTGGGGATTA GCCGGACGAC ACTTTACAAA
CGCCTGCGCG AGCAATGA
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| Protein sequence | MATATSTHAQ LIQASWARCR DHGLQPQSAP DFDCLTRAEL SALLERRQAL LQHTRDAVLP
QYAHLLGNAS YLVMLADASG CLLETWGSRR FVCPQHQHGF SAGAHWHERG VGTNALGTAL
VCAEPVHVGQ DEHFLRQNRY MASAAAPLYD AQRQLVGVLD VASDGYLPAT QTLGLVRMMG
QSLENRLILA QHAEQHAQLL FNSACDNLDS PWAGLLVFDE RGQVLAANHR ADSLLGGNPL
QQNVEQLFQI PLYQLLAHPQ QQPFALQAAG RNRFHCQWQA PWQSTPRSML HSGDPRMEKA
LGQASLMLEK DIPLLVQGET GVGKEVFVQT LHRASSRARQ PLIAVNCAAI PAELVESELF
GYDKGAFTGA HHKGNPGLIR KADKGVLFLD EIGDMPLPTQ ARLLRVLQSR SIQPLGSGEP
VAVNIRVVSA SNRDLAEEVR AGRFRQDLYY RIAAMAVVLP ALRERTDRRE LIEHIHARYR
DPYQPQRLGQ PILELLDRHP WPGNLRELVS VMQVALALAG DGPVGVEHLP AGFLAEAQGC
AVVSDCSDDE ADLQSLLKRA NGNLSAVARG LGISRTTLYK RLREQ
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