| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1727 |
|---|
| Symbol | |
|---|
| ID | 6110673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1922457 |
|---|
| End bp | 1923137 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641621518 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001748600 |
|---|
| Protein GI | 170720912 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.136748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT GCGCCCACGC CGCCCCCCAC CTGCCTGCCC TGCTCGCCGC CGGCGAAACC
CGCTTGTCGG CCGAGCAGAT CTACCCTCGC CTGTTCGACG CCATTCTCGA GCAGCGCTTG
CCGCCCGGCA GCCTGCTGCC CGAGCAGGCA CTGGGCAACG CCTTCGGCGT CAGCCGCACG
GTGATCCGCC GGGTACTCGG GCGCCTCTCG GACCAGCAAG TGGTGGTCCA GCGCCCCAGC
CACACCGCGC ACCTGGCCGC CCCTGATCCA CAACAGGCGC GCCAGGTACT CAGCGCCCGG
CGCCTGGCCG AAACCACCCT GATCAGCCTG GCAGCGCAAC GCGCGCGGCC GGCGCAGATC
CGCCAATTGC GTTCGCTGGT GGAGCGCGAG CGACAGCACC ACGAGCGTGG CGAACGTTGC
GCGGCGATCC GCCTGGGCGG CGAGTTCCAC CTCAAGCTTG CCCAGGTGGC CGCCAATGCA
CCGCTGGCAC GTTTTCTCAA TGGCCTGGTG CCGATGACCT CACTGATCAT CGCCCGCTAT
GAATCACCCT GCTGCGACCA CTGTGCCTGG CAAGAGCACG CGGCGATCAT CGATGCCGTG
GAGGCTGGTG ACGCGGCAGC GGCGCTTGCT CTGATGGACG AGCACCTGGA CCGCCTGGAA
GAAAAACTCG ACCTCGCCTG A
|
|---|
| Protein sequence | MTACAHAAPH LPALLAAGET RLSAEQIYPR LFDAILEQRL PPGSLLPEQA LGNAFGVSRT
VIRRVLGRLS DQQVVVQRPS HTAHLAAPDP QQARQVLSAR RLAETTLISL AAQRARPAQI
RQLRSLVERE RQHHERGERC AAIRLGGEFH LKLAQVAANA PLARFLNGLV PMTSLIIARY
ESPCCDHCAW QEHAAIIDAV EAGDAAAALA LMDEHLDRLE EKLDLA
|
|---|
| |