| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1602 |
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| Symbol | |
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| ID | 6110547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1777878 |
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| End bp | 1778369 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621393 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001748476 |
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| Protein GI | 170720788 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.730491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000811326 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCATT ACGTAACGCC CGACCTGTGC GACGCCTACC CCGACCTGGT CCAGGTGCTG
GAACCGATGT TCAGCAACTT CGGTGGCCGC GATTCATTTG GTGGCCAGAT CGTTACCATC
AAGTGCTTCG AGGACAACTC GCGGGTCAAA GAGCAGGTTG AGCTCGACGG CAAGGGCAAG
GTTCTGGTGG TCGATGGCGG TGGTTCGCTG CGCTGTGCAT TGCTCGGTGA CATGCTTGCC
GAAAAGGCTG CCAAAAACGG CTGGGAAGGC CTGGTGATCT ATGGCTGCGT GCGTGACGTC
GATGTGCTGA TCCAGACCAG CGTCGGTGTG CAGGCATTGG CCAGCCATCC GATGAAGACC
GACAAGCGCG GTATCGGCGA CCTCAATGTG GCTGTGACCT TCGCCGGCGT GACGTTCCGC
CCTGGTGAGT ATGTGTATGC CGACAACAAC GGCGTGATCG TCTCGCCAAG CCCGCTGGAA
ATGCCGCAGT GA
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| Protein sequence | MQHYVTPDLC DAYPDLVQVL EPMFSNFGGR DSFGGQIVTI KCFEDNSRVK EQVELDGKGK
VLVVDGGGSL RCALLGDMLA EKAAKNGWEG LVIYGCVRDV DVLIQTSVGV QALASHPMKT
DKRGIGDLNV AVTFAGVTFR PGEYVYADNN GVIVSPSPLE MPQ
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