| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1587 |
|---|
| Symbol | |
|---|
| ID | 6110532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1755644 |
|---|
| End bp | 1757269 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641621378 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001748461 |
|---|
| Protein GI | 170720773 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00091604 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCC TCGGCGTCTT TCTCTTCAGC CTCTTCTGGG CCCTTTTGGC CCAGGCCGAG
CCGACCCTGC AGGCCAGCGT CGATCGCACT CGCCTGGGCG CCGGCGAAAC CCTGGAACTG
ACGCTCGAAA GCCAGGATGT GACCCAGTTC GGCAAGCCCG ACCTGCGCGC CCTGGACGGC
GACTTCGAAG TGCGCGGCAC GCGCCAGTTG AACAGCCTGC ACACCCTCGA CGGCGAGACT
CGGGCCAGCA CTCGCTGGAT CATTACCCTG CTGCCGCGGC GCAGTGGCAG CCTGCGTATT
CCTGAGCTGC AACTGGGCAA ATCGCACAGC CAGGTCATCG ACCTGCAGGT GGTGCAAGCT
GATGCCAACC GCCCGGACAG CGCATCCCAG GTGTTCGTCG AGGCTACCCT GGACAGCAAT
GATGTATACG TCCAGGCGCA GGCCGTGCTG ACCTTGCGCA TCTACCATTC GGTGTCGCTG
TACGACGACA GCAGCCTCAG CCCGCTGCGG CTGGAAAACG CAAAAGTCGA GCCGCTGGGT
GACTCACGCA CCTATGAGAA GGAAATCAAC GGCGTACGCC ATGGGGTGAT CGAGACACGC
TACGCACTCT ATCCGCAGCA GAGCGGTAGC CTGGAAATTG CGCCCCTGAC GTTCACCGCC
ACCGCTGCCG ATACTGCTCA GCAGCCTGCG GGCACTGCAC GTACAGGTCG TCAGGTACAG
GTCAGTTCCC TGCCGCTACG CCTGACCGTT CGCCCAATCC CCGCCGCCTG GCCCACGGCC
GAACCGTGGT TGCCAGCCCG CAGCCTGACC CTTGAGGAGC ACTGGAACCC CGACCCTGGC
AGGCAGCAAC CCCAGATAGG CGATTCGCTG ACCCGCAGTA TTACGCTGCG CGCCGAAGGG
CTGTCCAGCA CCCAGCTGCC GCAACTGCCG GCCACCGAAA TCGTCGGCCT GCGCCGCTAC
CCGGACCAAC CGCTGCTGCG CAACGAAATC AGCGAGCGCG GTATGACCGC CAACCGCGAG
GAACGCGAAG CGCTGGTGCC GACTCACAGC GGCGAACTCG CCCTGCCGGC GCTGGAAGTC
ACCTGGTGGA ATACCCGCGA GGACCATCTG GAGCACAGCA GCCTGCCGGC GCGTAACCTG
AACGTGCAGG ACAACCCTGC CCTGAGCGGC GACACGCCGG TAGGCGATGC CGGCAGCGCC
AGCCATCTGC TCTGGCCTTG GCAACTCTCC ACCGTGATTT TCGCCCTCAC CACGGCGCTC
GGTTTTACCC TGTGGTGGCG CGCCCGCTCG CAACCAGCGG TACTGCGCGC CGCGCAGACC
GGCCCAAGCC CGCGCACCCT GCTGGACGAC CTCAAGCGCG CCTGCCAGGC CAACGATCCG
CAGGCTACGC GCCAGGCGCT CGATGCCTGG GCCCGGCAAC AGCCGGAGAC CCTGGCGGAG
ATGGCGGCGC GGTTCGTGCC GCTGTCGGAT GCGCTGGATG GATTGAACGG GGCGCTTTAC
AGCGAGAGTG GGCAGTATTG GCAGGGGGAG GATCTGTGGC GGGCGATTGG CACGATTCCA
CCGGCGGAAC AGGTGTTGTT GCCTTCGGGT GAGCCGGGGA GCTTGCCCCC GCTTTATCCG
AAGTGA
|
|---|
| Protein sequence | MSRLGVFLFS LFWALLAQAE PTLQASVDRT RLGAGETLEL TLESQDVTQF GKPDLRALDG
DFEVRGTRQL NSLHTLDGET RASTRWIITL LPRRSGSLRI PELQLGKSHS QVIDLQVVQA
DANRPDSASQ VFVEATLDSN DVYVQAQAVL TLRIYHSVSL YDDSSLSPLR LENAKVEPLG
DSRTYEKEIN GVRHGVIETR YALYPQQSGS LEIAPLTFTA TAADTAQQPA GTARTGRQVQ
VSSLPLRLTV RPIPAAWPTA EPWLPARSLT LEEHWNPDPG RQQPQIGDSL TRSITLRAEG
LSSTQLPQLP ATEIVGLRRY PDQPLLRNEI SERGMTANRE EREALVPTHS GELALPALEV
TWWNTREDHL EHSSLPARNL NVQDNPALSG DTPVGDAGSA SHLLWPWQLS TVIFALTTAL
GFTLWWRARS QPAVLRAAQT GPSPRTLLDD LKRACQANDP QATRQALDAW ARQQPETLAE
MAARFVPLSD ALDGLNGALY SESGQYWQGE DLWRAIGTIP PAEQVLLPSG EPGSLPPLYP
K
|
|---|
| |