| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1584 |
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| Symbol | |
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| ID | 6110529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1749936 |
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| End bp | 1753580 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621375 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001748458 |
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| Protein GI | 170720770 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.999097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00383377 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTC TCGCCATTCG CCTGAAGAAC CTGGCATCCC TGGCCGGCCC GGTCGACATC
GACTTCACCG CCGAACCCCT GGCCAGCGCA GGCCTGTTCG CCATCACCGG GCCTACCGGC
GCCGGCAAGA GCACCTTGCT CGATGCACTG TGCCTGGCGC TGTTCGGCAC TGTGCCGCGG
CTCAATGACA TCGGCCGCGA AGCCAAGGTG CCAGATGCCG ATGGCGAAAT CCCCACCTCG
GACCCGCGCA ACCTGCTGCG CCGCGGCACC GGCAGCGGCT TTGCCGAGGT CGACTTCGTC
GGCGTCGACG GCCACCGCTA CCGCGCGCGC TGGGAAGCCA ACCGTGCCCG CGACAAGGCC
AATGGCAAGC TGCAACTGAG CCGTCAGAGC CTCTATGACC TGGACAGTGA GCAGGTGCTG
GGCAGTGGCA AGAACGAATA CAAACAACAG ATCGAAGCCC GTCTGGGGCT CAACTTCGAG
CAGTTCACCC GCGCCGTGAT GCTGGCCCAG AGTGAATTCG GCGCCTTCCT CAAGGCCGAC
GACAAAGAAC GCAGCGAACT GCTGGAAAAG CTCACCAACA CCGCGATCTA CACGCGCCTT
GGCCAGCGTG CCTTCAGCAA GGCCCGCGAA GCCGGCGAAG CGCACAACGC GCTGAAAGAC
CGCGCCAGCC ACCTGCTGCC GATGGCCGCC GAAGCCCGAG CCGAGCTGGA CAAGCGCCTG
GAGCAGGCGC AACAACATCT CAAGGCCGAG CAAGCCCGCC AGCGTCAGCT GGAGCAACAG
CGCACCTGGC TCAACGAGCA ACGCCAGTTG CAGACCCAAC TCAGCGAAGC CGGTGCCGCC
CTGCACACTG CCGAGCAAAA CTGGCAAGCA ATGGCCGAGC AACGCCTCGA CCTGCAGCGC
CTGGAACGCC TGGCCCCGCA ACGGCACCAG TTCCATCGCC AGCAAGCACT GACCGCGCAA
CTGACGCCGT TGGCGGCGCA GATCGCCGAG CAACAACAGC TGCAAGCTGA TCTGCTGGAG
CGCACCCAGG AGCTGGAGCT TGCGCTGGTT GCAGCGCGCC AGACACTGGC CGACAGCCAG
ACGAAACACA GCGAAAGTGC CCCGCGCTTG CGCCAGGCGT TTGCCGGCCA GGACAGCCTA
ACGCGCCTAG ACGCTGAGCT GGAGGCGCAA CGCACGGCCA GGCAGCAGGC CGACCTGCAC
GTCGCCGAAG GCCAACAGCA GTTGCAGCAA CTGGACGAAC AACAGCAGCG CAGCCTGCAA
CAGCTGGCGC AGATCGACGC GGCCTTGGCA GACAGCCAGC ACCTGGCCGG GCTGGCCAAT
GCCTGGCAGG CCTACCTGCC CCAACTCAAG CAAGTGATGC TGATTGGCGG GCGCCTGAGC
AAGGGCCGTG AGGAACTGCC CGGCCTGCAG GCCAGCGCCA GCGAAGCCAA TGCGCAGTGG
CAGGCCCAGC ATGACGCGTT CGAGCTGTTG TTCCGCGAAG CCAAAGCAGA GCCGCAGGCG
CTGGCTGAGC AGATCGACCT GCTCGGCAAC ATGCTGCAGG ACAATCGCAA GCAGCAGCGG
GCGGTCGAAG AACTGGCGCG CCTGCATGGC CGCGAGCAGG AGCTGCGCAG TCAACTCGAT
GGTCTGCGTG AACGTCAGCA GCACGCCATG CAGCAACGCC AACAGCTGAT TGGTGAAGGC
ACCGCAGCCA AGGCGGAGCT GGAAGCGGCC GAGCAAGCGC TCAACCTCAC CCGCCAGTTG
CTGGAGCGTC AGCGCCTGGC GCGCAATACC AGCGTCGAAG AGCTGCGCGG CCAACTGCGT
GACGGCGAAC CGTGCCCGGT CTGTGGCAGC GCCGAACACC CGTTCCACCA GCCTGAGGCT
TTGCTGCAGA GTCTGGGCCG ACATGATCAG GTCGAAGTAG ATGCTGCGCA GAAGCACGTC
GATACTCTCA ACGGCAAACT GGTCGAGCTA CGCACTCAGC TTGGCGTGGT CAACGCCCAG
CTCAAGGACC ATCAGCAGCA ACAGGCGCAG CTGGGCGAAC AGTTGCAGCC GCTGGTCGCA
CACGTACAGT CGCACCCCCT CTGGCCTGCC CTGGCGCCAC AGGACGACAA GGCCCGTACA
GTGTGGTTGG AAAGCCAGCT GAAGCGCCTG GACAATGAGA TCAAACAGGA CGAGAAGCGC
CAAAGCGCCC TGCTTGCCCT GCAAAAAGAC GCTGCCCGCC TCACACAGCA ATTACAAGCC
GCACAGGAGG CGCGGCAACA GGCCCAGCGC CACCTGGACC ACCAGCACCA AGCCCTGGCC
AACGATGAAC AGCATCTGCA ACAAGGCCTT GATGACTTGG CCAGTGTGTT GCCGGCCGAT
GTACTGAAGG CCTTGAGTGA TGATCCGGCC AATGCCTTCC TGAGCCTCGA CCAGCAGATC
GCGCAGCGCC TGCAGCAGCT GGAACAGCGC AAGGACGAGC AGGACGAACA GCACGCGCGC
CAACTGCAAC TGGACAAGCT GCGCGATCAG CAGCAGACGC GCCTGCAGGC TCAGCAACAG
CTGCAGCATA CTCTCGCAGC CCTCGACGAG CAGCGTCTGC AGGCTCAGGC GCAGCTGGCC
GCGCTACTCG GCGAACACAC CAGCGCCGAA GCCTGGCAAC ACCACCTGGA GGTGCACCTG
GAGCAGGCCC GCGCCCTTGA TGCCCAGACT GCTGAGCGCC TGCAGGCGCT GCGCAACCAG
GGCGTGCAAC TGGCCGCAGA GCTCAAGGCC AATACCCAGC GCCAGCAGGC ACTGGAGCAC
GAGTGCCAGC AGCTTCAGGG CGAAATTGCC CAATGGCGCA GCGAACATCC CGAACTGGAT
GACAGCGGGC TCGATCGCTT GCTGGCCATG GACGACTCCC AGCTGAGTAC GCTGCGCCAG
CACCTGCAGG CAGCAGAAAA TGCCATCGAG CAAGGCCGCG TGCTGCTCCA GGAGCGTGAG
CAGCGCCTGC AACAGCACGC CGCTCAAGCA CAGGGTGACG TGAACGGCGA AGACCTTGAG
CAATCACTGG CCGGCCTTGC CGAGCAACTG AACGTTCAGG AGCAGCAGTG CGCTGAGTTG
CGCGCGCAGC AGGCTGACGA CCAGCGTCGC CAGCAGGCAT ACCAGGCCCT TGCCTGCGAA
ATCGAACAGG CCTACCAACA GTGGCAGCGC TGGGCACGCC TGAACGCGCT GATCGGTTCG
GCCTCTGGCG ATGTGTTCCG CAAGATCGCC CAGGGCTACA ACCTTGACCT GCTGCTGCAC
CATGCAAACG CCCAATTGCG CCAACTGGCG CGGCGCTATC GCCTCAAACG TGGCGGCAGC
GCCCTGGGGC TGCTGGTGCT GGACACCGAA ATGGGCGACG AACTGCGCTC GGTGCACTCG
CTGTCCGGCG GTGAGACCTT CCTGGTGTCG CTGGCCCTGG CCCTGGGCCT GGCCTCGATG
GCGTCGAGCA CCCTGCGTAT CGAGTCGCTG TTCATCGACG AGGGGTTCGG CAGCCTCGAC
CCTGAGTCGC TTCAGTTGGC CATGGACGCC CTCGACGGTC TGCAGGCGCA GGGCCGCAAG
GTGGCGGTGA TCTCCCACGT GCAAGAGATG CACGAGCGCA TTCCGGTGCA GATCCAGGTG
CGTCGCCAGG GCAACGGCCT GAGTGATGTC GAGGTGTGCG GGTGA
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| Protein sequence | MKILAIRLKN LASLAGPVDI DFTAEPLASA GLFAITGPTG AGKSTLLDAL CLALFGTVPR
LNDIGREAKV PDADGEIPTS DPRNLLRRGT GSGFAEVDFV GVDGHRYRAR WEANRARDKA
NGKLQLSRQS LYDLDSEQVL GSGKNEYKQQ IEARLGLNFE QFTRAVMLAQ SEFGAFLKAD
DKERSELLEK LTNTAIYTRL GQRAFSKARE AGEAHNALKD RASHLLPMAA EARAELDKRL
EQAQQHLKAE QARQRQLEQQ RTWLNEQRQL QTQLSEAGAA LHTAEQNWQA MAEQRLDLQR
LERLAPQRHQ FHRQQALTAQ LTPLAAQIAE QQQLQADLLE RTQELELALV AARQTLADSQ
TKHSESAPRL RQAFAGQDSL TRLDAELEAQ RTARQQADLH VAEGQQQLQQ LDEQQQRSLQ
QLAQIDAALA DSQHLAGLAN AWQAYLPQLK QVMLIGGRLS KGREELPGLQ ASASEANAQW
QAQHDAFELL FREAKAEPQA LAEQIDLLGN MLQDNRKQQR AVEELARLHG REQELRSQLD
GLRERQQHAM QQRQQLIGEG TAAKAELEAA EQALNLTRQL LERQRLARNT SVEELRGQLR
DGEPCPVCGS AEHPFHQPEA LLQSLGRHDQ VEVDAAQKHV DTLNGKLVEL RTQLGVVNAQ
LKDHQQQQAQ LGEQLQPLVA HVQSHPLWPA LAPQDDKART VWLESQLKRL DNEIKQDEKR
QSALLALQKD AARLTQQLQA AQEARQQAQR HLDHQHQALA NDEQHLQQGL DDLASVLPAD
VLKALSDDPA NAFLSLDQQI AQRLQQLEQR KDEQDEQHAR QLQLDKLRDQ QQTRLQAQQQ
LQHTLAALDE QRLQAQAQLA ALLGEHTSAE AWQHHLEVHL EQARALDAQT AERLQALRNQ
GVQLAAELKA NTQRQQALEH ECQQLQGEIA QWRSEHPELD DSGLDRLLAM DDSQLSTLRQ
HLQAAENAIE QGRVLLQERE QRLQQHAAQA QGDVNGEDLE QSLAGLAEQL NVQEQQCAEL
RAQQADDQRR QQAYQALACE IEQAYQQWQR WARLNALIGS ASGDVFRKIA QGYNLDLLLH
HANAQLRQLA RRYRLKRGGS ALGLLVLDTE MGDELRSVHS LSGGETFLVS LALALGLASM
ASSTLRIESL FIDEGFGSLD PESLQLAMDA LDGLQAQGRK VAVISHVQEM HERIPVQIQV
RRQGNGLSDV EVCG
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