Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1581 |
Symbol | |
ID | 6110526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1747879 |
End bp | 1749009 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621372 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_001748455 |
Protein GI | 170720767 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0171669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA CCTGGACGAG CCTGCTGACC GCTAGTCTCA TGAGCCTGAC TTTGAATGCC CAGGCCGTCA CGCTGCTGGT GGGCAGTTAT ACCGATGGTG CGAGCCAAGG TATCTACCGT TACCAGTTCG ACAGCAAAAC TGGCCTCATC AGCCCTACGC CGCAGCAGGT GGTCAAGAGC GTCAGCCCTT CCTGGCTGGT GCTTTCGGCG GATCAGCGGC AACTGTTCGC GGTTAATGAG GCGCCAAAGG GACACGCCAG CAGTTTCAGC GTGAGTAGCA AGGGTGAGAT CAAGCCGCTG AACCAGGTTG CCACCCGCGG CGATGAACCT ACGCATGCCA GCCTCAGCCG CGACCAGCGT TACCTGTTCG TTGCCAACTA CGCCGTTGCT CCAGACCCGG GCGGCAGCCT GGTGGTGATA CCGGTGGCCA AAGACGGCAA ACTCAAGGAT GTGGTGCAGC AGGCCGGACA CGCGCCCAGT GGGGTGAACC CCGAGCGCCA GGCCGGTGCC CATGTGCATT CAGTGGTGCT GTCGCCGGAC GGTAGTCACC TGTATGCCAG TGACCTGGGA GCCGATAGGG TATTCATCTA CCGCTACGAC GGCGCCAGCA CCGACCGCCC GCTAAGCCCG GCCATCCCCG CATCGGTCGA ACTGCCAGCT GGCAGCGGCC CGCGTCACCT GTTGTTCGAT GCCAAGGGGC GGCATGCCTA TCTGACGCTG GAAATGAGCG CCGAAGTGGT CATGTTCGAT GTCGATGATG CTGCCCTGCG CGAACGCCAG CGCCTGCCGC TGACCGAGCA GCAGGACGCG GCGGCAAAGG CGGCAGGCGG CCTGCACCTC TCGGCGGACG GGCGTTTTCT TTATGTGAGC AATCGCGGCA CGGCCAATGA GATCGTTGCA TTCAGTGTGG GCAAGGATGA TGGGCAGCTT GCCTTCCTGC AGCGTCGATC GGTGGAGGGC GACCATCCTC GGGAGTTTGC CCTGGACCCG AGTGACAACT TCCTGCTGGT GGCCAACCAG AAGAGCAACC AGATCGTGGT CATGCGCCGC GATCCGCGTA CGGGCAAGCT GGGTGAGACT GTGCAGACCC TGGCACAGGA CGCACCTTCG GATCTGAAGT TTATCGAGTG A
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Protein sequence | MNPTWTSLLT ASLMSLTLNA QAVTLLVGSY TDGASQGIYR YQFDSKTGLI SPTPQQVVKS VSPSWLVLSA DQRQLFAVNE APKGHASSFS VSSKGEIKPL NQVATRGDEP THASLSRDQR YLFVANYAVA PDPGGSLVVI PVAKDGKLKD VVQQAGHAPS GVNPERQAGA HVHSVVLSPD GSHLYASDLG ADRVFIYRYD GASTDRPLSP AIPASVELPA GSGPRHLLFD AKGRHAYLTL EMSAEVVMFD VDDAALRERQ RLPLTEQQDA AAKAAGGLHL SADGRFLYVS NRGTANEIVA FSVGKDDGQL AFLQRRSVEG DHPREFALDP SDNFLLVANQ KSNQIVVMRR DPRTGKLGET VQTLAQDAPS DLKFIE
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