Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1559 |
Symbol | |
ID | 6110500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1721283 |
End bp | 1721948 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641621346 |
Product | sporulation domain-containing protein |
Protein accession | YP_001748433 |
Protein GI | 170720745 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.331959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.230524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTGC TGGATAAAGG GATGAAACAG CGCATGGTGG GTGCGTTGGT GCTGGTGGCG CTGGCGGTTA TTTTTCTGCC GATGCTGTTC ACCCGCGAGG ACGAAATGCG TCAGGTGCGC GTAGAGGCCC CGCAGGCTCC AGCGATGCCG AGCTTGCCTG AAGTCAAGGT AGAGCCGGTT GCCGTGCCCG AGCCGCAACC GCTGCCGCAA GAGGCGCAGC AGGCGCCCGT AGTGGTCAAC GAATCCTCGG CCCCGGTGGC CACGCCGAGC CAGCCGATCA CGCCGTCGCC GCAAACCCAG GCTCAGATCC AGCCTAAGCC GCAAGCGTCG GCGCCTGCTT CGGCGTCCAA GGCCCAAGTG CAACCGGCCA CTACACCTGC GCCGGCAGCA ACCGCTACCG CGCCGTCGAA AATCGACGTC AACGGCTTGC CGGTGAGCTG GTCGATCCAG CTGGCTAGCC TGTCCAATCG CGCCGGGGCC GAGAGCCTGC AGAAAACCCT GCGCAGCCAG GGTTACAATG CCTACATCCG TTCGGCCGGT GGCATGAATC GGGTATATGT GGGGCCGCTG ATCGAGCGTG CCGAGGCTGA GCGCCTGCGT GATGCAATCA ATCGGCAGCA GAAGCTGAAG GGCTTTGTGA TCCGTTTCCA GCCAGAACGC GGTTGA
|
Protein sequence | MAVLDKGMKQ RMVGALVLVA LAVIFLPMLF TREDEMRQVR VEAPQAPAMP SLPEVKVEPV AVPEPQPLPQ EAQQAPVVVN ESSAPVATPS QPITPSPQTQ AQIQPKPQAS APASASKAQV QPATTPAPAA TATAPSKIDV NGLPVSWSIQ LASLSNRAGA ESLQKTLRSQ GYNAYIRSAG GMNRVYVGPL IERAEAERLR DAINRQQKLK GFVIRFQPER G
|
| |