Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1548 |
Symbol | |
ID | 6110489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1708033 |
End bp | 1709466 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621335 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001748422 |
Protein GI | 170720734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.272021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCA AAACGCTCTA CGACAAACTC TGGGAAGCCC ATGAGGTCAA GCGCCGTGAT GACGGCTCGT CCTTGATCTA CATCGACCGC CATATCATTC ACGAAGTGAC CTCGCCCCAG GCCTTTGAAG GCCTGCGCCT GGCCAACCGC AAGCCGTGGC GCATCGATGC CAACATCGCT ACCCCGGACC ACAACGTGCC GACCACCCCG GAACGCAAGG GCGGGATCGA GGCCATCGTC GACCAGGTGT CACGCCTGCA GGTGCAGACC CTTGATGAGA ACTGTGACGA ATACGGCATC GTCGAATTCA AGATGAATGA CGTGCGTCAG GGCATCGTTC ACGTCATCAG CCCCGAGCAG GGCGCCACCT TGCCCGGCAT GACCGTGGTC TGCGGTGACT CGCACACTTC CACCCACGGC GCCTTCGGTG CCTTGGCCCA TGGCATCGGC ACCTCCGAGG TCGAGCACGT GCTCGCCACC CAGTGCCTGG TCGCCAAAAA GATGAAAAAC ATGTTGGTGC GCGTCGAGGG GACATTGCCC GCCGGCGTGA CGGCCAAAGA CATCGTGCTT GCCGTGATCG GCAAGATCGG TACCGCCGGT GGCAACGGCC ACGCCATGGA ATTTGCTGGT AGCGCCATCC GCGAGCTGTC CATGGAAGGC CGCATGACCA TCTGCAACAT GTCGATCGAG GCCGGTGCGC GGGTCGGTCT GGTTGCCACC GATGCCACCA CCATTGCTTA CGTCGAAGGC CGCCCTTATG CGCCCAAAGG CGAGCAGTGG GAGCGTGCAG TCGAGGCGTG GAAAGACCTG GTATCCGATG ACGATGCGGT GTTCGACACC GTGGTCGAGC TCGATGCAGC GCAGATCAAG CCGCAGGTCA GCTGGGGCAC GTCGCCCGAG ATGGTCCTGG CCGTCGACCA GCGTGTGCCG GACCCAGCCG CCGAGGCCGA TCTGGTCAAG CGCGGCTCGA TCGAGCGCGC CCTCAAGTAC ATGGGCCTGC GCGCCAACCA GGCGATTACC GATATCCATC TGGACCGTGT GTTCATAGGC TCCTGCACCA ACTCGCGGAT CGAAGACCTG CGAGCCGCAG CTGAAATCGC CAAAGGTCGC AAGGTGGCTG CCACCGTCAA GCAGGCCATC GTCGTGCCGG GTTCGGGCCT GGTAAAGGCC CAGGCCGAGC GTGAAGGCCT GGACAAGATC TTCCTCGAGG CCGGTTTCGA ATGGCGTGAG CCAGGCTGCT CTATGTGCCT GGCGATGAAC CCGGACCGCC TGGAAAGCGG CGAGCATTGC GCGTCCACCT CCAACCGTAA CTTCGAAGGG CGTCAGGGCG CTGGGGGCCG TACCCACCTG GTCAGCCCGG CCATGGCTGC CGCTGCGGCG GTGACTGGCC ACTTCATCGA TGTTCGCGAG TTGATCCAAG GGAGCGCAGC ATGA
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Protein sequence | MAGKTLYDKL WEAHEVKRRD DGSSLIYIDR HIIHEVTSPQ AFEGLRLANR KPWRIDANIA TPDHNVPTTP ERKGGIEAIV DQVSRLQVQT LDENCDEYGI VEFKMNDVRQ GIVHVISPEQ GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QCLVAKKMKN MLVRVEGTLP AGVTAKDIVL AVIGKIGTAG GNGHAMEFAG SAIRELSMEG RMTICNMSIE AGARVGLVAT DATTIAYVEG RPYAPKGEQW ERAVEAWKDL VSDDDAVFDT VVELDAAQIK PQVSWGTSPE MVLAVDQRVP DPAAEADLVK RGSIERALKY MGLRANQAIT DIHLDRVFIG SCTNSRIEDL RAAAEIAKGR KVAATVKQAI VVPGSGLVKA QAEREGLDKI FLEAGFEWRE PGCSMCLAMN PDRLESGEHC ASTSNRNFEG RQGAGGRTHL VSPAMAAAAA VTGHFIDVRE LIQGSAA
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