| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1471 |
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| Symbol | |
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| ID | 6110400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1609310 |
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| End bp | 1610266 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641621246 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001748345 |
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| Protein GI | 170720657 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.580459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCTG ACACCCTTAC CGACCAACTG AGCCTGTTCC TCGATGTGCT GGAGACTGGC
AGTTTTTCCG CTGCCGCCCG GCGCCATCCA CTTACCCCCT CCGCCGTCGC CCGGCGCATC
GACAGCCTCG AGAGCGCCGT GGGCAGCCGC CTGTTCACCC GCAGCACCCA TGCGGTGCGT
GCCACGCCTG CAGGCAACGC CTTCGCCGAG CGCGCCCGGC GCATCATCGA GGAACTGCGC
CTGGCCCGCG CCGAGGCCGT ATCACTGAGC AGTGCTCCGG AGGGCTTGAT CCGTATCGAC
GCCCCTGCCG CCTTCGGCCG CCGCCACCTG GCTCCGGCCA TTGCCGACTT CCTGGTGGCC
TACCCAGGCC TTGATGTGCA CCTGCGGCTG ATCGACAGCT TCGTCGACCT GCACGGCAGC
CACCTTGGCG AGGTCGACCT GGTGCTGCGT GCGGGCCCTC TGGCCGATAC CCGCCTGGTC
GCCACACCGC TGGCCTACAT GGTCCGCGTC GCTTGCGCCA GCCCCGCCTA CCTGGCCAGC
CGCGGCATAC CCGCCTGCCC CAGCGAACTG CCCGGTCACG ACGGGCTGGA CTGGGACGGC
CTGGCACCGC CGTTCGCCTG GCGCTTCAAC GTCGATGGGC AATCACGGCT GTACCGGCCC
TCGCGGATGC GCATGGCCGC CAACAATGCT GAAACCCTGC TGTTCGGCGC GCTTGCCGGC
CTGGGCGTTG CGCACCTGCC GACCTGGCTG ATCAGCGACT ACCTGCTGCG TGGCGAACTG
GTACCACTTT TTTGCGACAA CGGCCTGCCC GCTGCAGAGA CCAGCGGTAT TTATGCGCTA
CGCCTGGCAC ATGAAACGAA CTCTCGCAGC CGCTTGCTGC TCGAATTCCT CAAGAGCCGC
TTCAGCCCGA TCCCTCCTTG GGACATGGCA CTGCGAAGTG AGCTGCGATG GCAATGA
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| Protein sequence | MSPDTLTDQL SLFLDVLETG SFSAAARRHP LTPSAVARRI DSLESAVGSR LFTRSTHAVR
ATPAGNAFAE RARRIIEELR LARAEAVSLS SAPEGLIRID APAAFGRRHL APAIADFLVA
YPGLDVHLRL IDSFVDLHGS HLGEVDLVLR AGPLADTRLV ATPLAYMVRV ACASPAYLAS
RGIPACPSEL PGHDGLDWDG LAPPFAWRFN VDGQSRLYRP SRMRMAANNA ETLLFGALAG
LGVAHLPTWL ISDYLLRGEL VPLFCDNGLP AAETSGIYAL RLAHETNSRS RLLLEFLKSR
FSPIPPWDMA LRSELRWQ
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