Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1462 |
Symbol | |
ID | 6110391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1601968 |
End bp | 1603161 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641621237 |
Product | major facilitator transporter |
Protein accession | YP_001748336 |
Protein GI | 170720648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.554548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC CAATCTTGAG CCGCGCCCTG ATCCTGCTGA TGGCTACCGC CACCGGCCTG GCCGTGGCCA GCAACTACTA CGCACAGCCA CTGCTGCACA GCATCGCCGA ACAGTTCGGC CTGAGCACCG CCAGCGCCGG CAGCATCGTC ATTGCCGCGC AACTCAGCTA TGGCGCGGGC CTTCTGCTGC TGGCGCCTTT GGGCGACCTG TTCGAGCAAC GCCGCCTGAT CGTGATCATG TCGGTCATTT CCACCTTGGG CCTGGTGATC AGCGCCTGCG CCCCGAGCCT GCCCTGGCTG ATCCTGGGGA CCGCGCTCAC CGGGCTGTTT TCGGTGGTGG CGCAGATCCT CGTGCCCATG GCCGCCACGC TGAGTGAGCC GCATCAGCGC GGGCGCGCAG TGGGCACGCT GATGAGCGGC TTGCTGCTGG GCATACTGCT GGCGCGTACC GCTGCCGGCT TCATGGCCGA ACTGGGTGGC TGGCGCAGCA TCTATGTGCT GGCTGCGGTG CTGATGGCCG TCACCGCCTT TGCCCTGTAC CGCAGCCTGC CACAACACCA CAGCCATGCC GGGCTGAAAT ACCCGGCACT GATCGGTTCT GTATTCCGCC TGTTCATCGA GGAGCCAGTG CTGCGCCTGC GCTCGCTGCT GGGCTTGCTG GCGTTCAGCC TGTTCGGGCT GTTCTGGACG CCGCTGGCGT TTCTGCTGGC GCGTGAGCCC TACCATTATT CCGACGCGGT TATCGGCCTG TTCGGCCTTG CCGGCGCGGC AGGTGCGCTT TCGGCCAACT GGGCCGGCCG CCTGGCTGAC CGTGGCAGAG GCTCGCTGGG CACCACAGTG GGCCTGGTAG CGCTGTTGTT GTCATGGATA CCGCTGGGTT TCGCCGAAAG CTCGCTACTG GCCTTGCTGC TCGGCGTACT GGTGCTGGAC CTGGCCGTGC AGCTGGTGCA TGTGAGCAAC CAGAATGCAG TCATCGCCTT GCGGCCCGAA GCACGTACCC GGCTCAATGC CGGTTACATC ACCTGTTATT TCATCGGCGG CGCCCTAGGC TCCTTGCTGG GCACACAGTT GTTCCAGTAC CAGGGCTGGA TGGGCATCGT GACGGCAGGG TTGCTGATCG GGGCGCTGGC GCTGCTGGTG TGGGGTTGGG CCGAGCACAA GCGCAAGCGC GCCGTAAAGG CCTGTGCGGC ATGA
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Protein sequence | MNTPILSRAL ILLMATATGL AVASNYYAQP LLHSIAEQFG LSTASAGSIV IAAQLSYGAG LLLLAPLGDL FEQRRLIVIM SVISTLGLVI SACAPSLPWL ILGTALTGLF SVVAQILVPM AATLSEPHQR GRAVGTLMSG LLLGILLART AAGFMAELGG WRSIYVLAAV LMAVTAFALY RSLPQHHSHA GLKYPALIGS VFRLFIEEPV LRLRSLLGLL AFSLFGLFWT PLAFLLAREP YHYSDAVIGL FGLAGAAGAL SANWAGRLAD RGRGSLGTTV GLVALLLSWI PLGFAESSLL ALLLGVLVLD LAVQLVHVSN QNAVIALRPE ARTRLNAGYI TCYFIGGALG SLLGTQLFQY QGWMGIVTAG LLIGALALLV WGWAEHKRKR AVKACAA
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