| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1439 |
|---|
| Symbol | |
|---|
| ID | 6110367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1579559 |
|---|
| End bp | 1580713 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641621213 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001748313 |
|---|
| Protein GI | 170720625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0292117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA TCCCCTACTG GCGCCTGTCC AGCTTCTACC TTTTCTACTT CGCTCTGCTG
GGTTCGACAG CCCCGTTCCT GGCCCTGTAC TTCGACCACC TCGGCTTCCC CCCGGCGCGT
ATCGGCGAGC TGGTAGCCAT CCCCATGCTG ATGCGCTGCA TCGCCCCCAA CCTGTGGGGC
TGGCTGGGTG ATCGCAGCGG CCAGCGGCTG CTGATCGTGC GCCTCGGCGC GCTGTGTACC
CTGGCCACCT TTTCGCTGAT CTTCTTCGGC AAGAGCTACG CCTGGCTGGC GCTGGTGATG
GCCCTGCACG CGTTCTTCTG GCACGCGGTG CTGCCGCAGT TCGAGGTCAT CACCCTGGCC
CACCTGCACG GGCAGACGGC GCGCTACAGT CAGGTGCGCC TGTGGGGCTC GATCGGTTTC
ATCCTCACCG TGGTCGGCCT TGGGCGGTTG TTCGAATGGC TGAGCCTGGA TATCTACCCG
GTCGCCCTGG TAACCATCAT GGCGGGCATT GTCGCGGCCA GCCTGTGGGT GCCCAATGCC
CAACCGGTGG AGCAGGGCGA GCGGCGCGAC GCGGGCGGCT TTCTGCGCCA GTTGCGGGCG
CCTGGGGTGG TTGGCTTCTA CCTGTGCGTG GCCTTGATGC AGCTCAGCCA CGGGCCTTAC
TACACCTTCC TCACGTTGCA CCTGGAACAC CTGGGCTACA GCCGCGGCGC CATCGGCCTG
CTGTGGGCGT TGGGGGTGGT GGCCGAAGTG CTGATCTTCA TGGTCATGAG CCGCATCTTC
ACGCGCTTCA GCGTGCAGCA GGTGCTACTG GCCAGCTTCC TGTTGGCCGC CCTGCGCTGG
CTGCTGCTGG GCAACCTGGC GGGCGAGCCG GGTGTGCTGA TCTTCGCCCA GGTGCTGCAC
GCAGCCACGT TCGGCTGCTT CCACGCTGCC TCCATCGCCT TCGTCCAGGC CAGTTTCGGC
GCACGTCAGC AAGGCCAGGG CCAGGCATTG TATGCCGCGC TGTCTGGCAC CGGCGGTGCG
CTGGGGGCGT TGTATTCGGG CTACAGCTGG AAGCTGCTGG GCCCCACCTT CACCTTTGGT
ATGGCCAGCG CCGCAGCGCT CGCGGCAGCC GTTATCATTG CCACTCGTTT GAAATCGACC
AGGACCAGCC GCTGA
|
|---|
| Protein sequence | MNPIPYWRLS SFYLFYFALL GSTAPFLALY FDHLGFPPAR IGELVAIPML MRCIAPNLWG
WLGDRSGQRL LIVRLGALCT LATFSLIFFG KSYAWLALVM ALHAFFWHAV LPQFEVITLA
HLHGQTARYS QVRLWGSIGF ILTVVGLGRL FEWLSLDIYP VALVTIMAGI VAASLWVPNA
QPVEQGERRD AGGFLRQLRA PGVVGFYLCV ALMQLSHGPY YTFLTLHLEH LGYSRGAIGL
LWALGVVAEV LIFMVMSRIF TRFSVQQVLL ASFLLAALRW LLLGNLAGEP GVLIFAQVLH
AATFGCFHAA SIAFVQASFG ARQQGQGQAL YAALSGTGGA LGALYSGYSW KLLGPTFTFG
MASAAALAAA VIIATRLKST RTSR
|
|---|
| |