Gene PputW619_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1285 
Symbol 
ID6110213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1424024 
End bp1424959 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID641621059 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001748159 
Protein GI170720471 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.850336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC CGCGTTTTCG TCCCTATTTC CTTCACCCCA GGTTCTGGGG CCTGTGGCTG 
GGCCTGGGCC TGCTGTGGCT GGTGGTGCAA TTGCCCTACC GCGCCCTGTT GTGGCTTGGC
GCTGCCCTGG GCGCGCTGAT GTACCGGGTG GCCGGTGAGC GCCGACGCAT CGCTGCACGC
AACCTGGAAC TGTGTTTCCC CGAGATGTCC GTCGACGAAC GGCGCCGTTT GCTGAAGGCG
AATTTCGCCT CCACCGGCAT CGCTTTCTTC GAAATGGCCA TGAGCTGGTG GTGGCCCAAG
GCCAGGCTGG CGCGCCTGGC GCACATCGAG GGCCTCGAGC ACCTGCAAGC CGCGCAACAG
GCCGGGCAGG GCGCGATCCT CATGGCTGTG CATTTCACCA CCCTGGAGAT CGGCGCCGCG
TTGCTGGGCC AGGTGCACAC CATCGACGGC ATGTACCGCG AGCATGGCAA TCCGCTGTTC
GACTTCATCC AGCGCAGCGG CCGTGAGCGC CACAACCTCG ATTCGCTGGC GGTGGAGCGT
GAAGACGTGC GCGGCATGCT TAAACTGCTG CGCGCCGGCC GCGCCATCTG GTATGCGCCC
GACCAGGACT ACGGCGCCAA GCAGAGCCTG TTCGTGCCGT TGTTCGGCAT CCAGGCGGCG
ACGGTTACCG CCACCACCAA GTTCGCCCGC CTGGGCAAGG CACAGGTCAT TCCCTTCACC
CAGAAGCGCC TGGAGGATGG CAGTGGCTAT CGCCTGGTGA TCCACCCGCC GCTGGAGAGC
TTCCCCGGTG AAAGCGAAGA GGCCGATTGC CTGCGCATCA ACCAGTGGAT CGAAGGCGTG
TTGCGCGAGT GCCCCGAGCA ATACCTGTGG GCGCACCGGC GCTTCAAGTC GCGGCCTGAA
GGTGCGCCGC GGCTGTATGA AAAGAAAAAA CGCTGA
 
Protein sequence
MERPRFRPYF LHPRFWGLWL GLGLLWLVVQ LPYRALLWLG AALGALMYRV AGERRRIAAR 
NLELCFPEMS VDERRRLLKA NFASTGIAFF EMAMSWWWPK ARLARLAHIE GLEHLQAAQQ
AGQGAILMAV HFTTLEIGAA LLGQVHTIDG MYREHGNPLF DFIQRSGRER HNLDSLAVER
EDVRGMLKLL RAGRAIWYAP DQDYGAKQSL FVPLFGIQAA TVTATTKFAR LGKAQVIPFT
QKRLEDGSGY RLVIHPPLES FPGESEEADC LRINQWIEGV LRECPEQYLW AHRRFKSRPE
GAPRLYEKKK R