| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1260 |
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| Symbol | |
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| ID | 6110188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1397856 |
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| End bp | 1400408 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641621034 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001748134 |
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| Protein GI | 170720446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0218384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA CAGCGAGCAG CGGGCAACGA GAGCGACTGG TCATCGTCGG CAACGGCATG
GTGGGCCACC ATTGCGTCGA GCAACTGGTC GAGCGCGGCG CGCTGGCGCG CTTTGAGCTG
CGCGTGTTCG GCGAGGAGCG CCAGCGCGCC TACGACCGCG TGCACCTGTC TGAATACTTC
AGCGGCAGCT GTGCCGAAAC CCTGGCCCTG TGCGAGCAGG GTTTCTATGG CGCCAACGGG
GTGCACCTGC ACCTGGGTGA AGCGGTGCTG CAAATCGACC GCGAGCGCTG TGAGGTGGTT
ACCGCCGAAG GCCGCTACGG GTATGACCAT CTGATCCTGG CCACCGGCTC CTACCCCTTC
GTGCCCCCGA TCGAGGGTTC CAGCGGCAAC GCGCGACTGG TCTATCGCAA CCTCGATGAC
CTCGACGCCA TACGCGCCGC TGCCGTTGAT GCCACCCGCG GAGTAGTGGT TGGCGGCGGT
CTGCTGGGCC TTGAGGCGGC CAATGCCCTC AAGTCCCTGG GCCTTCAAGC GCACGTGGTG
GAGTTCGCCC CACGGCTGAT GCCGGTGCAG CTGGATGCTG AAGGCGGCGC CGCGCTCAAG
GCGCAGATCG AAGCCCTGGG TGTAGGCGTG CATCTGTCAC GAGCCACCCA GTCGATCAGC
GATGGTGAGG CCTACCGTTA CCGGATGAAT TTCGACGGTG GCGAACACCT GGAAACCGAC
CTGGTCGTGT TCTCTGCCGG CATCCGCCCG CAGGACGCCC TGGGCCGTGC CTGCGGCCTG
GAGATCGCCG CGCGCGGTGG CGTGGTGATC GACAATCACT GCCGCTCCAG CGACCCACGC
ATCTTCGCTA TCGGTGAATG CGCCTCGTGG AACGGCAGCG TGTTCGGCCT GGTTGCTCCG
GGCTACAGCA TGGCGCGCAA CCTGGCGGCG CTGTTGTTGG GCGAGGCGGC CGGGGAATTC
ACCGGGGCCG ACATGTCGAC CAAGCTCAAG CTGCTGGGCG TCGATGTCGG CTCCATCGGC
GACGCCCATG GCGCCACGCC CGGCTCGCGC AGCTACCGCT TCATCGACGA GGCCAACGCC
GCCTATCGCC GGCTGGTGGT CGATGCCAGC GGCAAGCACG TGCTCGGTGC GGTGCTGGTG
GGCGACAACA GCTACTACGA CACACTGCTG CAATACGCCC AGAACGGCAT CGCCCTGCCT
GCCGACCCGG CGGCGCTGAT CTTGCCGCAA GGCGGTGGCG CACCGGCCCT GGGCGCCGAT
GCGCTGCCTG ACAGCGCGAC CATCTGCTCG TGCCACAACG TCAGCAAGGG CGCAGTGTGC
GCAGCGATCG ACAGTGGTTG CGCCGACCTT GCCGCGGTCA AAGGCTGCAC CAAGGCGGCC
ACCGGCTGTG GTGGCTGCGC GGCGCTGCTC AAGCAAGTGT TCGAGCATGA ACTCACCGCC
CGTGGCGTGA CCGTGGACAA GAGCCTGTGC GAGCACTTCG CCTACACCCG CCAGGAGCTT
TACGGGCTGG TGCGGGTGGG GGGCATACGC ACCTTCAACG ATTTGCTGGC GCGCCATGGC
AAGGGCCATG TCGGCTGCGA CATCTGCAAG CCGGCGGTGG GCAACATCCT CGCTTCGTGC
TGGAACCAGC CGATCATGGA CCCAGCGCTG GTGCCGCTGC AGGACACCAA CGACACCTTC
ATGGCCAACA TGCAGAAAAA CGGTACCTAC TCGGTGGTGC CGCGCATTCC CGGCGGTGAA
ATCACCCCGG ACAAACTGAT CGTGATCGGC CAGGTGGCCA AGAAGTACGA TCTTTACACC
AAGATCACCG GCGGCCAGCG CATCGACCTG TTCGGCGCCC AGTTGCACGA GCTGCCGCTG
ATCTGGGGCG AGCTGATCGA GGCCGGCTTC GAGACTGGCC ACGCGTACGG CAAATCGACC
CGCACGGTGA AGTCCTGCGT AGGCAGCACC TGGTGCCGCT ACGGTGTGCA GGACAGCGTA
GCCATGGCGC TGCGCCTGGA GGATCGCTAC AAGGGCCTGC GCAGCCCGCA CAAGCTCAAG
TTCGCGGTCT CTGGCTGCAC CCGCGAATGT GCCGAGGCGC AAAGCAAGGA CATCGGCGTG
ATCGCCACCG ACAAAGGCTG GAACCTCTAC GTCTGTGGCA ATGGCGGCAT GCGCCCACGG
CATGCCGAAC TGTTCGCCAC CGATCTGGAC GATGAGACCC TGGTGCGCCT GATCGACCGC
GTGCTGATGT TCTACATCCG CACCGCCGAC AAGTTGCAGC GCACGTCGGT ATGGCGCGAA
AGCCTGGACG GCGGCCTGGA CTACCTCAAG CAGGTGATCC TCGACGACAG CCTGGGCCTG
GCTGCCGAGC TGGAAGCGCA GATGCAGCAT GTGGTCGAGC AGTACGAATG CGAATGGGCC
AACGCCCTCA ACGACCCGGA AAAGCTCAAG CGCTTCCGTA CGTTCGTCAA CGATCGACGC
GCCGACCCGG ACGTGCACTT CGTCCGCGAG CGTGAACAGC GTCGCCCCGC TGCACCCCTG
CACCTGATCC CTACCATTGA GGAGGCTGTG TGA
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| Protein sequence | MKATASSGQR ERLVIVGNGM VGHHCVEQLV ERGALARFEL RVFGEERQRA YDRVHLSEYF
SGSCAETLAL CEQGFYGANG VHLHLGEAVL QIDRERCEVV TAEGRYGYDH LILATGSYPF
VPPIEGSSGN ARLVYRNLDD LDAIRAAAVD ATRGVVVGGG LLGLEAANAL KSLGLQAHVV
EFAPRLMPVQ LDAEGGAALK AQIEALGVGV HLSRATQSIS DGEAYRYRMN FDGGEHLETD
LVVFSAGIRP QDALGRACGL EIAARGGVVI DNHCRSSDPR IFAIGECASW NGSVFGLVAP
GYSMARNLAA LLLGEAAGEF TGADMSTKLK LLGVDVGSIG DAHGATPGSR SYRFIDEANA
AYRRLVVDAS GKHVLGAVLV GDNSYYDTLL QYAQNGIALP ADPAALILPQ GGGAPALGAD
ALPDSATICS CHNVSKGAVC AAIDSGCADL AAVKGCTKAA TGCGGCAALL KQVFEHELTA
RGVTVDKSLC EHFAYTRQEL YGLVRVGGIR TFNDLLARHG KGHVGCDICK PAVGNILASC
WNQPIMDPAL VPLQDTNDTF MANMQKNGTY SVVPRIPGGE ITPDKLIVIG QVAKKYDLYT
KITGGQRIDL FGAQLHELPL IWGELIEAGF ETGHAYGKST RTVKSCVGST WCRYGVQDSV
AMALRLEDRY KGLRSPHKLK FAVSGCTREC AEAQSKDIGV IATDKGWNLY VCGNGGMRPR
HAELFATDLD DETLVRLIDR VLMFYIRTAD KLQRTSVWRE SLDGGLDYLK QVILDDSLGL
AAELEAQMQH VVEQYECEWA NALNDPEKLK RFRTFVNDRR ADPDVHFVRE REQRRPAAPL
HLIPTIEEAV
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