| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1244 |
|---|
| Symbol | |
|---|
| ID | 6110168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1373703 |
|---|
| End bp | 1374233 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641621014 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_001748118 |
|---|
| Protein GI | 170720430 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.247052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.300123 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGC TGGTTATGTT CGCTGCCGGT TCTGCCTGGG CGGCGGATTG CCCGGCATTG
CTGCAGGGCA GCCTGCCGGA GTTGCGTGGC AAGGGTGAGG TCGACCTTTG CCAGCGTTTT
GGCGGCAAGC CGTTGGTGGT GATCAACACA GCCAGTTATT GCGGGTTTGC GCCGCAGTTC
GAGGGGCTCG AGAGTACCTA CAAAGAGTAC AACGAGCAGG GGCTGGAAAT GCTCGGCGTA
CCGTCCAACG ATTTCAAGCA GGAAGATGCC GACAGCGAGA AGACGGCCAA GGTCTGTTAT
GCCAATTATG GCGTGACGTT CACCATGACC AAGACCCAGT CGGTACGGGG CAAAGATGCG
ATCCCGCTGT TCGTGGGGCT GGCGGAGCAG AGCAGTGCTC CGAAGTGGAA TTTTTACAAG
TACGTGGTTG ACCGCAAGGG CAAGGTGATT GCCAACTTCT CCAGCCTGAC CAAGCCGGAT
GATCCTGAGT TCAAGGCGGC GATCGAGAAG GCGATTGCAT CGCAGCCATA A
|
|---|
| Protein sequence | MPLLVMFAAG SAWAADCPAL LQGSLPELRG KGEVDLCQRF GGKPLVVINT ASYCGFAPQF
EGLESTYKEY NEQGLEMLGV PSNDFKQEDA DSEKTAKVCY ANYGVTFTMT KTQSVRGKDA
IPLFVGLAEQ SSAPKWNFYK YVVDRKGKVI ANFSSLTKPD DPEFKAAIEK AIASQP
|
|---|
| |