Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1240 |
Symbol | cobS |
ID | 6110164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1371048 |
End bp | 1371782 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641621010 |
Product | cobalamin synthase |
Protein accession | YP_001748114 |
Protein GI | 170720426 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.436418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.920424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGT TCTGGATTGC CCTGCAGTTC CTCAGCAGCC TGCCGGTACG CTTGTCGGGG ATGCCCGAAC CACGCGAAAT GGGGCGCTCA CTGCTGTGCT ACCCACTGGT CGGCCTGCTG TTCGGCCTGC TGCTGTGGCT TGCCAGCCAT CTGTTGCAAG GCGCGCCGGC ACCTTTGCAC GCGGCGTTGC TGTTGACGCT GTGGGTACTG CTCAGCGGTG CGCTGCACCT GGACGGCCTG GCAGACAGTG CTGATGCCTG GCTAGGTGGG TTCGGCGATC GCGAGCGTAC GCTCAAGATC ATGAAGGATC CGCGCAGCGG GCCGATTGCG GTGGTGACCC TGGTGCTGGT GTTGCTGCTC AAGTTCTGTG CGTTGTGGGT GCTGGTCGAG CGCGGCGCAG GTGCGCTGCT GGTGCTGGCG CCGGTGGTGG GGCGTGCGGC GATGCTTGGC CTGTTCCTTG GTACGCCCTA CGTGCGCCCG GGCGGCCTGG GGCAGGCGCT GGCCGAGCAC CTGCCGCGCC AGACTGCTGG CTGGGTGCTG CTGGGCAGTC TGCTGCTGTG CCTGCTGCTG GGCGGCTGGA GCGCGATCTG GCCGATGGCG CTGGCGCTTG GCGTGTTCTT GTGGTTGCGA CGATTGATGT GTCAGCGGTT GGGCGGGACA ACCGGCGATA CTGCCGGGGC GATGCTGGAG TTGCTGGAGC TCACCGTGGT GTTGGGGCTG GCGTTAGCGA CTTGA
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Protein sequence | MLPFWIALQF LSSLPVRLSG MPEPREMGRS LLCYPLVGLL FGLLLWLASH LLQGAPAPLH AALLLTLWVL LSGALHLDGL ADSADAWLGG FGDRERTLKI MKDPRSGPIA VVTLVLVLLL KFCALWVLVE RGAGALLVLA PVVGRAAMLG LFLGTPYVRP GGLGQALAEH LPRQTAGWVL LGSLLLCLLL GGWSAIWPMA LALGVFLWLR RLMCQRLGGT TGDTAGAMLE LLELTVVLGL ALAT
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