| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1238 |
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| Symbol | cobT |
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| ID | 6110162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1369425 |
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| End bp | 1370480 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641621008 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001748112 |
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| Protein GI | 170720424 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.282911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA CCTGGTGGCG TGACGCCTGC CAACCTCTCG ATACCGCCGC CATGGACCAG
GCCCGCGCCC GTCAACAGCA GCTGACCAAA CCTGCCGGAT CGCTCGGCCA GCTGGAAGCC
CTGGCAGTGC ACCTGGCCGG GCTGCAGGGG GTTGAACGAC CGAACCTGGA TCAGGTCGCC
ATCACTATTT TCGCCGGTGA TCATGGCGTG GTCGAGGAGG GTATTTCGGC CTATCCGCAG
GCGGTGACCG GGCAGATGCT GCGCAATTTC GTCGGCGGCG GCGCGGCGAT CAGCGTGCTG
GCGCGCCAAC TGCAGGCAAG CCTGGAAGTG GTCGATCTCG GCACCATCGA CCCACATCTG
GAATTGCCGG GTGTTCGCCA CCTGCGCCTG GGGAGCGGTA CCGCCAACTT CGCCCGCCAG
CCGGCGATGA CCGAGGTGCA GCTGCGCTCA GCCCTGCAAG CCGGCCGAGA CAGCGTCCTG
CGCGCTGCCC AGAGCGGCGC GCAGCTGTTC ATCGGTGGCG AGATGGGCAT CGGCAACACC
ACGGCTGCTG CGGCGCTGGC CAGCACGCTG CTGGGCTGCC CGGCGCGCGA GCTGAGTGGC
CCGGGCACTG GCCTGGACAC CGCTGGCGTA CGCCACAAGG CTGAAGTGAT CGAGCGTGCC
CTGGTGCTGC ATGGCCTGCG TGCCGACGAC CCGCTGCAGG CGCTGGGCTG TGTGGGTGGT
TTTGAGATCG CCGCTCTGGC CGGCGCCTAT CTGGCCTGTG CACAGCAGGG CATTGCAGTG
CTGGTGGACG GTTTCATCTG CAGCGTCGCC GCGCTGGTAG CCGTGCGCCT CAACCCGCAG
TGCCGGGCCT GGTTGCTGTT TGCCCACCAA GGTGCCGAGC CAGGGCACAA GGCGTTGCTC
GATGCCTTGC AGGCCGAGCC GCTGCTGGCC CTGGGTCTGC GCCTGGGCGA GGGCAGCGGT
GCGGCGCTGG CGGTGCCACT GTTGCGCCTG GCCTGCGTGC TGCACGGGCA GATGGCGACC
TTTGCCGAAG CAGCCGTAGC GGACCGCCCG GTATGA
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| Protein sequence | MNPTWWRDAC QPLDTAAMDQ ARARQQQLTK PAGSLGQLEA LAVHLAGLQG VERPNLDQVA
ITIFAGDHGV VEEGISAYPQ AVTGQMLRNF VGGGAAISVL ARQLQASLEV VDLGTIDPHL
ELPGVRHLRL GSGTANFARQ PAMTEVQLRS ALQAGRDSVL RAAQSGAQLF IGGEMGIGNT
TAAAALASTL LGCPARELSG PGTGLDTAGV RHKAEVIERA LVLHGLRADD PLQALGCVGG
FEIAALAGAY LACAQQGIAV LVDGFICSVA ALVAVRLNPQ CRAWLLFAHQ GAEPGHKALL
DALQAEPLLA LGLRLGEGSG AALAVPLLRL ACVLHGQMAT FAEAAVADRP V
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