| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1124 |
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| Symbol | |
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| ID | 6110043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1241562 |
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| End bp | 1242545 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620889 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_001747998 |
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| Protein GI | 170720310 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGA ACACGGCATC ACCTGACCCG CGCCTGCGCG ATGCCATGGG CCTGGTCCTG
TTGGCCTGCC TGCCTGGCCT GGCGATTTCG TTCTGGCTGC TGGGTTGGGG CCTGCTCTGG
AGCTTGGGGC TATGCGCATT CACTGCTGCT TGCTGCGAGG CGGCGGCACT GGCATTGCGC
AAACAACCGG TCACAGCAGC ACTAAGCGAT GGTAGCGCCT TGGTCACCGC AGTGCTCCTG
GCCCTCGCCC TGCCCACTGC GGCGCCCTGG TGGTTGCCGA TGATCGCAGC AGGGATTGCC
ATAGGCTTGG GCAAGCAAGC CTTCGGTGGG GCCGGCCGTA ACGTGTTCAA CCCGGCGATG
GTTGGGTACG CCTTCGTGCT GCTGAGCTTC CCATTGCAGA TGAACCACTG GCCGGCGCAA
GCGCCAGGCT TCAGCGATAG CCTGCAGTTG GTCTTTGCCA ATGGCGAGCA GATCGATGCG
TGGGCTGGAC CTACCGTACT CGACGGCCTC AGGCACAACC ATAGCCTGAC CATAGATGAG
CTGTTCGCCA GCCACCCAGG CTTCGGCAAC TTTGGCGGCC ACGGCGTCGA ATGGGTCAAT
CTGGCGTTCC TGTCGGGTGG GCTATTTCTG TTGCAGCGCA AGGTGTTCAG TTGGCACGCG
CCTGCAGGTT TGCTGGCGGG ATTGTTTCTG TTCAGCCTGC TGGCCTGGAA TGGCTCCGGC
TCGGATTCCA ATGGCTCACC GCTGCTGCAC CTGCTCAGCG GCTCGACCAT GCTGGCGGCA
TTTTTCATCG CCACGGAGCC TGTTTCCGGC CCAAAGACCG ATGTAGCCAG GCTGCTGTTC
GGGCTGAGCG CAGGGGCCTT GATCTACCTG ATCCGGACTT GGGGTAGTTA CCCCGACGGT
ACCGCTTTCG CCATCCTGCT GATGAACCTT GCGGTACCCT TTCTGGACCG TCTAGCCTTG
AGGTATCGGC AGGTGAGGCC ATGA
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| Protein sequence | MSRNTASPDP RLRDAMGLVL LACLPGLAIS FWLLGWGLLW SLGLCAFTAA CCEAAALALR
KQPVTAALSD GSALVTAVLL ALALPTAAPW WLPMIAAGIA IGLGKQAFGG AGRNVFNPAM
VGYAFVLLSF PLQMNHWPAQ APGFSDSLQL VFANGEQIDA WAGPTVLDGL RHNHSLTIDE
LFASHPGFGN FGGHGVEWVN LAFLSGGLFL LQRKVFSWHA PAGLLAGLFL FSLLAWNGSG
SDSNGSPLLH LLSGSTMLAA FFIATEPVSG PKTDVARLLF GLSAGALIYL IRTWGSYPDG
TAFAILLMNL AVPFLDRLAL RYRQVRP
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