| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1080 |
|---|
| Symbol | |
|---|
| ID | 6109999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1185224 |
|---|
| End bp | 1187650 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620845 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_001747954 |
|---|
| Protein GI | 170720266 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC AGCAGGATTT TCCGGAACAA CCCGACGACA ACAGCGATAT CGAACACCTT
GATGGTCAGG CCCAAACCGG CCATGGCCAT GCCCTCGCCC TGCCCGGCCA ACAATTGCCG
GACAAGGTCT ACGTGATTCC GATCCACAAC CGCCCGTTCT TCCCAGCACA AGTCCTGCCG
GTCATCGTCA ACGAAGAGCC TTGGGCCGAG ACCCTCGACC TGGTGGCCAA GACACCGGAT
CACTGCCTGG CGCTGTTCTT CATGGACACC CCCCCCGAAG ATCACCGCCA TTTCGACACC
GCGGCCTTGC CGGAGTACGG CACCCTGGTC AAGGTGCACC ATGCCAGCCG CGAAAACGGC
AAACTGCAGT TCGTCGCCCA GGGCCTGACT CGGGTACGCA TCCGCACCTG GCTCAAGCAT
CATCGCCCGC CCTATCTGGT CGAAGTCGAA TACCCACGCC AGCCAAGCGA GCCGACCGAC
GAGGTCAAGG CCTACGGTAT GGCCCTGATC AATGCGATCA AGGAACTGCT GCCGCTCAAC
CCGCTGTACA GCGAGGAGCT GAAGAACTAC CTCAACCGCT TCAGTCCCAA CGACCCATCG
CCACTTACCG ACTTTGCCGC CGCACTCACC TCGGCCACCG GCAACCAGTT GCAGGAAGTG
CTCGATTGCG TGCCCATGCT CAAGCGTATG GAAAAAGTCC TGCCGATGCT GCGCAAAGAA
GTCGAAGTCG CGCGCCTGCA GAATGAGATT TCGGCCGAGG TCAACCGGCA GATCGGCGAG
CACCAGCGCG AATTCTTCCT CAAGGAACAA CTCAAGGTCA TCCAGCAGGA GCTTGGCCTG
ACCAAGGACG ACCGCAGTGC CGACCTCGAA CAGTTCCAAC AGCGCCTGCA AGGCAAGACC
CTGCCGGAGC AGGCAAAAAA ACGCATCGAT GAAGAAATGG CCAAGCTGGC CATTCTTGAA
ACCGGCTCTC CCGAATACGC CGTCACCCGC AACTATCTGG ATTGGGCCAG TGCCCTGCCC
TGGGGCGTGT ATGGCAAGGA CAAGCTCGAC CTGAAGCATG CGCGCAAGGT GCTCGACCAG
CATCACGCGG GCCTCGATGA CATCAAGGAA CGCATCTTGG AGTTCCTCGC CGTGGGCGCC
TGGAAGGGCG AGATCAGTGG TTCGATCGTA CTGCTGGTGG GCCCGCCTGG CGTGGGCAAG
ACCAGCATCG GCAAGTCCAT CGCCGAATCG CTCGGCCGCC CGTTCTACCG GTTCAGCGTT
GGCGGCATGC GCGACGAGGC CGAGATCAAG GGGCACCGAC GCACCTATAT CGGCGCCCAA
CCAGGCAAGC TGGTGCAGGC CCTGAAGGAT GTCGAGGTGA TGAACCCGGT GATCATGCTC
GACGAGATCG ACAAGATGGG CCAGAGCTAT CAGGGCGACC CTGCCTCGGC GCTGCTGGAA
ACGCTGGACC CTGAACAGAA CGTCGACTTC CTCGACCATT ACCTGGACCT GCGCCTGGAC
TTGTCCAAGG TGCTGTTCGT GTGTACCGCC AACACGCTGG ATTCGATCCC CGGCCCACTG
CTCGACCGTA TGGAAGTGAT CCGCCTGTCC GGCTACATCA CCGAAGAGAA ACTGGCCATC
GCCAAGCGTC ACCTGTGGCC CAAACAGCTG GAAAAGGCCG GCGTGGCCAA GACGAGCCTG
GCCATCAGCG ATAGCGCCCT GCGCGCAGTG ATCGAGGGCT ATGCCCGCGA AGCCGGCGTA
CGCCAGCTGG AAAAACAGCT GGGCAAACTG GTGCGCAAGG CCGTGGTCAA GCTCTTGGAA
GCCCCGGATG CCAAGCTCAA GATCGGCACC AAAGACCTGG AGGCCGCGCT CGGCATACCA
GTGTTCCGCA GTGAACAGGT GCTGGCAGGC AAAGGCGTGA TTACCGGCCT TGCCTGGACC
AGCATGGGCG GCGCGACATT GCCGATCGAG GCAACCCGCA TCCACACCCT GAATCGCGGC
TTCAAGCTCA CCGGCAAGCT GGGTGACGTG ATGAAGGAAT CTGCCGAAAT CGCCTACAGC
TACGTCAGCT CCAACCTCAA GCAATTTGGT GGTGATCCGG CTTTCTTCAA CGAAGCCTTC
ATTCACCTGC ACGTGCCAGA AGGCGCCACG CCCAAGGATG GTCCGAGCGC CGGTATCACC
ATGGCCAGCG CACTGCTGTC GCTGGCCCGT GACCAGGCAC CGAAAAAAGG GGTGGCCATG
ACCGGCGAGC TGACCCTGAC CGGGCAGGTG CTGCCGATTG GTGGCGTGCG GGAGAAGGTG
ATCGCAGCGC GGCGGCAGAA GATCTTCGAA CTGATCCTGC CAGAGCCCAA CCGCGGGGAC
TTCGAAGAAT TGCCTGAGTA CTTGCGTGAA GGGCTGACCG TGCACTTTGC CAAGCGCTTT
GCCGACGTGG CTAAAGTGCT GTTCTGA
|
|---|
| Protein sequence | MSDQQDFPEQ PDDNSDIEHL DGQAQTGHGH ALALPGQQLP DKVYVIPIHN RPFFPAQVLP
VIVNEEPWAE TLDLVAKTPD HCLALFFMDT PPEDHRHFDT AALPEYGTLV KVHHASRENG
KLQFVAQGLT RVRIRTWLKH HRPPYLVEVE YPRQPSEPTD EVKAYGMALI NAIKELLPLN
PLYSEELKNY LNRFSPNDPS PLTDFAAALT SATGNQLQEV LDCVPMLKRM EKVLPMLRKE
VEVARLQNEI SAEVNRQIGE HQREFFLKEQ LKVIQQELGL TKDDRSADLE QFQQRLQGKT
LPEQAKKRID EEMAKLAILE TGSPEYAVTR NYLDWASALP WGVYGKDKLD LKHARKVLDQ
HHAGLDDIKE RILEFLAVGA WKGEISGSIV LLVGPPGVGK TSIGKSIAES LGRPFYRFSV
GGMRDEAEIK GHRRTYIGAQ PGKLVQALKD VEVMNPVIML DEIDKMGQSY QGDPASALLE
TLDPEQNVDF LDHYLDLRLD LSKVLFVCTA NTLDSIPGPL LDRMEVIRLS GYITEEKLAI
AKRHLWPKQL EKAGVAKTSL AISDSALRAV IEGYAREAGV RQLEKQLGKL VRKAVVKLLE
APDAKLKIGT KDLEAALGIP VFRSEQVLAG KGVITGLAWT SMGGATLPIE ATRIHTLNRG
FKLTGKLGDV MKESAEIAYS YVSSNLKQFG GDPAFFNEAF IHLHVPEGAT PKDGPSAGIT
MASALLSLAR DQAPKKGVAM TGELTLTGQV LPIGGVREKV IAARRQKIFE LILPEPNRGD
FEELPEYLRE GLTVHFAKRF ADVAKVLF
|
|---|
| |