| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0857 |
|---|
| Symbol | |
|---|
| ID | 6109774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 944701 |
|---|
| End bp | 945687 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641620621 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001747731 |
|---|
| Protein GI | 170720043 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.407643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATT CAGACTTGAC CACCCCCGAC CCGTCGCAAG CAGCACTGCG TTGGCTGGCC
AGGATCAACG AGCAGCCTGA GGTAGCGCAC AGTGCGGCGT TCCAGCGCTG GTTGCTGGCC
GACCCCAGGC ACCGTGAAGC CTATGCCCAG GCCCAGGCGC TGTGGCAGAA GAGTGCGGCT
CCCGCGGCAC GCCTGGCCGA GGAAGAACAC GCCGACCTGC AACGATACCT GGATGTCATG
GCCAAGGCGC CTGCCCCGCC TCGCTGGTGG CGCGCCCGCG CCCGGGCACT GGCCGTAGCA
GCGTGTCTGG TGCTGGCCGT GGGCGTTGCG GGGGGCTGGC ATCCGGGGTA CTGGGTGCAG
GACCTGCAGG CCGATTTCAG CAGCACAGAC GCCATTCGCC AGGTGACGCT GGCTGACCAG
TCGCAGGTGA CGCTGGATGC GGGCAGTGCC ATAGCTGTCG ATTTCCAGCA GGGGCAGCGT
CATGTGCGGC TGTTGCATGG CGCTGCATTC TTCAAGGTCA CGCACACCGG TGCCCCGTTT
GTAGTACAGG CGGCAGGGGG GCAGGTGCGG GTGCTGGGCA CCGAGTTCGA AGTGCGCGAG
CAGGCTGAGG GGGCACAGGT CACGGTGCGC AACGGTCGGG TGGCGGTCAC GCCAGCTCAG
GGGCAGGCCG CCCGTGAGCT GACGGCCAAC CAGCAACTGG CCTATGCCAG AGGCCAGGCG
GGTGATACGG CGAGTGTGGA CAGCGACAGC CGTCTGGCCT GGCGCCAGGG CTGGGTCAAT
TACTACCAGG TGCCATTGGC GCAGGTAGTC GGGGACCTGG GGCGCTATTA CCCGGGGCGG
ATCGTGCTGC TCGATAGCGA GTTGGGGCAG CGAAAGGTCA GCGGCAGTTT CCCGGTGCGC
GAGCCACTGG CGGCACTGGA TTCGCTGGGC AAGGTGATGG GGTTCTCGCG GCAGACGGTT
CTCGGCCGGT TGACAGTTAT CCGTTAA
|
|---|
| Protein sequence | MSHSDLTTPD PSQAALRWLA RINEQPEVAH SAAFQRWLLA DPRHREAYAQ AQALWQKSAA
PAARLAEEEH ADLQRYLDVM AKAPAPPRWW RARARALAVA ACLVLAVGVA GGWHPGYWVQ
DLQADFSSTD AIRQVTLADQ SQVTLDAGSA IAVDFQQGQR HVRLLHGAAF FKVTHTGAPF
VVQAAGGQVR VLGTEFEVRE QAEGAQVTVR NGRVAVTPAQ GQAARELTAN QQLAYARGQA
GDTASVDSDS RLAWRQGWVN YYQVPLAQVV GDLGRYYPGR IVLLDSELGQ RKVSGSFPVR
EPLAALDSLG KVMGFSRQTV LGRLTVIR
|
|---|
| |