| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0793 |
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| Symbol | mscL |
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| ID | 6109710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 884434 |
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| End bp | 884853 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641620557 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_001747667 |
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| Protein GI | 170719979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.312074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATGA TCAGTGAGTT CAAGGCCTTC GCGGTCAAGG GCAATGTCGT CGACATGGCG
GTCGGTATCA TTATCGGCGC TGCATTCGGC AAGATAGTCT CCTCATTCGT CGGCGATATC
ATCATGCCGC CACTGGGAAT ATTGATCGGA GGCGTGGACT TCAGTGACCT GGCCATTACC
TTGAAGGCGG CTGAAGGCGA TATACCGGCC GTGGTGCTGG CCTACGGCAA GTTCATCCAG
ACCGTGATCG ACTTCGTGAT CGTGGCATTC GCCATCTTCA TGGGTGTCAA GGCGATCAAC
CGCCTGAAAC GCGAAGAGGC CGTGGCGCCA AGCGCACCGC CGACCCCTAC CCCTCAGGAA
ACGCTGCTGA CCGAGATTCG TGACTTGCTC AAGTCGCAGA ACCAGAATCG CCTGCCTTGA
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| Protein sequence | MGMISEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDI IMPPLGILIG GVDFSDLAIT
LKAAEGDIPA VVLAYGKFIQ TVIDFVIVAF AIFMGVKAIN RLKREEAVAP SAPPTPTPQE
TLLTEIRDLL KSQNQNRLP
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