Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0783 |
Symbol | |
ID | 6109700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 873735 |
End bp | 874640 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620547 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001747657 |
Protein GI | 170719969 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.806567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGT TAAGTGCCAT GCAGACCTTC CGCCGGGTCG TCGACCTCGG CAGCTTCAGC GCCGCGGCCA GCCAGGCGGG CCTGTCGCAT ACCGCTCTGT CACGCCAAGT GACGCAACTT GAGCGCCATC TGGGCACACA ATTACTGGCA CGAACCACCC GCCGTCTGCA CCTGACCGAA GCCGGTGCGC TGTTCTACCG CCACTGCGTG CAGATCCTCG AACAGATGCA GGCGATGACC CTGGAGCTGT CCGAACATCA AAAACAGCCC TCTGGCACCC TGCGCCTGGG CGTGGCTACC GCCTTCGGCG AGCTGGAACT TGGCCGCTGG CTACCGGAGT TCGTCGAGCG CTATCCCCAG TTGCAGATCG AGCTGCACTG CAGCGACCGA TTCATCGACT TGCTGGAAGA AGAGATCGAC ATCTGCCTTC GGGTTACCGA TCACCTGCCT GACTCAAGCC TGGTAGCGCG ACGGCTGGCC ACCAGCGAGG TACTGCTGGT GGCCGCTCCC CGCTACCTCG AACGGCACGG TACACCTGCC TCGCCAGACG ATCTGGCCAG CCACCCACTG CTCGGCTATA GCCAACTACT TCACCCTCAG CGCCTGCTGC TTGCCAACGA GGCAGGTGAG CAGCGGCAAA TCCTTATGCC CCGACGCGTA AGCGCCAACT CGCCAATGGC CCTGCGTGCT GCGGCTATCG GCGGCTTAGG CATCGCCAGC TTCGATTGTT TCATCGTTCA GGATGCCCTG GCTGATGGGC GCCTGGTGCC AGTGCTGGCC GATTGGCGGC TAGCAGCACG GGGCCTGTAT GCGGTCTATC CACAGAGCCG TTACCTGGCG CCCAAGGTGC GTGCGTTGCT CGACTTTGTG CAAGCCTTCT ATACGCGCCC ACCGTGGCGA CCCTGA
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Protein sequence | MDQLSAMQTF RRVVDLGSFS AAASQAGLSH TALSRQVTQL ERHLGTQLLA RTTRRLHLTE AGALFYRHCV QILEQMQAMT LELSEHQKQP SGTLRLGVAT AFGELELGRW LPEFVERYPQ LQIELHCSDR FIDLLEEEID ICLRVTDHLP DSSLVARRLA TSEVLLVAAP RYLERHGTPA SPDDLASHPL LGYSQLLHPQ RLLLANEAGE QRQILMPRRV SANSPMALRA AAIGGLGIAS FDCFIVQDAL ADGRLVPVLA DWRLAARGLY AVYPQSRYLA PKVRALLDFV QAFYTRPPWR P
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