Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0760 |
Symbol | |
ID | 6109677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 844995 |
End bp | 848471 |
Gene Length | 3477 bp |
Protein Length | 1158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620524 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001747634 |
Protein GI | 170719946 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0191191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC CGACTTCACT CCATCCCGGC TTCATGATCG TGCATGGCAA CCGCCTGGAC GACTTGCGCA GCCTGGTGGT GAGCTGGATG CGGCGCTATC CGCTGGCCCC CCTGGAAAAC GAAATCGCCC TGGTACAAAG CAACGGCATC GCCCAGTGGC TCAAGCTGGC TTTGGCCGAG GACCCGCTCG CAGATGACCA GGGCGGTTGT GGGATCGCTG CTGCCATCGA AGTGCAGTTG CCGGGCAGCT TCATGTGGCA GCTGTACAGA AAAGTCCTCG GGCGTGACGA GATTCCAGAG GTTTCTCTGC TCGACAAGGC CCCGCTGACC TGGCGACTCA TGCGTTTGCT GCCAGCGCTG ATCGAACGCC CGCATTTCGA ACCGTTGCGG CGCTTTCTCA CTGACGACGG TGATCTGCGC AAACGCTATC AGCTGGCAGA GCGCTTGGCT GACCTGTTCG ACCAGTATCA GGTCTATCGC GCCGACTGGC TGAAGGACTG GGCTGCCGGG CAGCACGTTC TCAATACGGC CCGTGGCGAA CGCAAGCCCC TGGCTCCTGG CAACCGCTGG CAGGCCGAGC TGTGGCGGGC CTTGCTCGAG GATGTAGGTG AACAAGGCAT GGCCCAGAGC CGTGCAGGAG TGCACCAGCG ATTCACCGAA TGTATCAACA ACCTTGAGCA ACCCCCTGCG GGTCTGCCTT CACGGGTAAT CGTATTCGGT ATCTCATCTC TGCCTGCCCA AGCGTTGGAA GCACTGGCAG GCCTTGCGCG GTTCAGCCAG GTATTGTTGT GTGTGCACAA CCCTTGCCGA CATCACTGGT CGGACATCGT TGCCGACAAG GACCTGCTAC GCCACCAGTA CAAGCGCCAA CAGCGTAAGC AGGGCATGCC CGTGCAACTG GATGACGAGT CCTTGCATCA GCACGCCCAC CCCTTGCTGG CCGCCTGGGG CAAGCAGGGC CGCGACTACA TCAACCTGCT CGACAGTTAT GACGACCCAG GCAGCTACCA AGGTGCATTC AGCGATGGGC GCATCGACCT GTTCAGCGAA ACCGAGCCCG CAACACTGCT CAATCAGCTG CAGGACGATA TCCTCGAGCT GCGCCCGCTT ACCGAAACCC GTGAGCTGTG GCCTGAGGTC GATCTGGCAA AAGACCGCTC CGTTCGCTTC CACATCGCCC ACAGTCCACA GCGCGAAGTT GAGATCCTGC ACGACCAGTT GTTGGCCCGC TTCAGCGCCG ACCCCACCCT GCGCCCGCGC GACGTCATCG TCATGCTCCC GGCAATCGAC AACTATGCAC CGCATATCCG TGCCGTTTTC GGCCAGTTAC AGCGCAACGA CCCGCGTTAC ATACCTTTCA CCCTGACCGA TCAGGGCCAG CGCGGGCGTG ATCCATTGTT GATTGCCCTT GAGCATCTGC TCAAGCTGCC AGACAGTCGT TTCGCCGTCA GCGAAGTGCT CGATCTCCTG GACGTACCGG CTGTGCGAGG ACGTTTCGGG ATTCGCGAAA GCGACCTGCC CACGCTGCAC CGCTGGATCG AAGGTGCCGG TATACGTTGG GGGCTGAATG CCGAGCAGCG AGCGACCCTG GGCCTGCCCG AAGGCCTGGA GCAGAACAGC TGGAGGTTCG GCCTAAGGCG TATGTTGTTG GGTTATGCCG TCGGTATGGG TGAAGGCTGT GACGGTATCG AACCCTACGA CGAAATCGGC GGCCTGGATG CTGCGCTGAT CGGCCCGTTG GTGGCCTTGC TCGACGCTCT CGATGTGGCC AACCATGTCC TCTCTCAGCC AGCCACTGCT GCCCAGTGGG GCGAGCGACT GAACGCGCTG TTGCAGGTGT TTTTCCTCGC AGAAGGCGAG CATGACGAAT TCCTGCTCAT GCAACTGCAG GAGCTGCGCG ATAGCTGGCT GGAGGTGTGC GAGACCGTAG GCTTACAGGA CTTGCTGCCC CTCACGGTCA TACGCGAGGC GTGGTTGTCG GGCCTGGATC AGGGCAAGCT GTCCCAGCGT TTTCTTGCAG GTTCAGTAAA CTTCTGCACC CTCATGCCGA TGCGTGCCAT CCCGTTCCGG GTGGTCTGCC TGCTGGGCAT GAATGACGGC GATTACCCGC GCGCCCAGCA GCCGCTGGAC TTCGACCTGA TGGCCAGTGA CTACCGCCCC GGCGATCGCT CGCGCCGGGA GGATGACCGT TACCTGCTGC TCGAAGCGTT GTTGTCCGCG CGCGATCAGC TGTACATCAG CTGGGTCGGC CGGAGCATCC GCGATAATAG CGAGCGCCCG GCATCCGTAC TCATAGGCCA ACTGCGCGAT CACCTGGCTG CAGGTTGGCG ACTGGCCGGT AGCGGCGACA GCCAGCAAGC GGGCGAGCAG TTGTTGCATG CGTTGACTCA AGAGCATCCA CTGCAGCCCT TCAGCCCGCG CTATTTCCAG AAAGGCAGCG CGTTGTTCAG TTATGCCCAT GAATGGCAGT TGCTGCATCA GGTCGGCGAT GAGGCTAAAC AGTCGGACGT TGGCCTGCCG CCTTACAGTA GTAATGAAGC CCTTACCCTC ATGCAACTGC AGGATTTTCT GCGTCATCCG GTGCGACACT TCTTCAGCCA GCGCCTGAAA GTGTTCTTCG AGGCGCTGGA GTCGCCGACG CCGGATGAGG AGCCGTTCGT CCTCGATGCC TTGCAGCGCT ATAGCGCCAG TGAAAGCCTG CTCGGCGCGG CGCTGGCCGA ACCGGAAAAC GCCGAGCAGG CGCTGCAAGC CCAGGCGCGC CGGCTGCAGG CATGCGGGAT GCTGCCCTTG GCCGGGTTCG GCGAGCTTTT GCAGGCAGAG CTGATTCAGC CGCTGCCCGA CCTGCTGCAA CGCCATCGCC ACTTGCTGCA GCGCTGGCCC GCTTTGGTCG AGGGCGCACT GCCGATCCAT TTCGAGCATG GCGGCCATCG CCTGGAGGGT TGGCTTGGCC GGGTGTATCA GGCCGACGAC CAAAGCCTGT TGAGCATCAC CACGGTGCCC AACACCATCA GCGCCGGGCG TAACAGCCTC AAGTGGCACC GGTTGATCGC CAGCTGGGTC ATGCACCTGG CGGCGTGCGC CGAAGGCTAT CCGCTGCATA GCGCCCTGTT GGCCAGCGAC ATCACTCTGC TGCTCGCGCC ACTGCCACAA CACGAAGCTG CCGAGCAGCT CGGCCATCTG CTGGTGTCAC GCCAGGCCGC AATGAATGCG CCGCTGCCGG TTGCCGCCAA GACAGCGTTC GCCTGGCTGG CCCAGGACGA TCCTGACAAA GCCCTCGCCG CAGCGGCCCG TGCTTACGAA GGTGATGGCC GCACCAGTTT CGGTGAGCGC AGCGAAAGCC CGGCCCTGGC CCGACAGTTC CGTGACTTCG CCGCACTCAG TGCCGACGAA ACCTTTGAAG GCTGGTGCGA AACCCTGTAC CGCCCGTTAT TCAGCGCAGC CTGGCAGACG CTGGGCAACC CGGAGAGTGG CGCATGA
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Protein sequence | MANPTSLHPG FMIVHGNRLD DLRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE DPLADDQGGC GIAAAIEVQL PGSFMWQLYR KVLGRDEIPE VSLLDKAPLT WRLMRLLPAL IERPHFEPLR RFLTDDGDLR KRYQLAERLA DLFDQYQVYR ADWLKDWAAG QHVLNTARGE RKPLAPGNRW QAELWRALLE DVGEQGMAQS RAGVHQRFTE CINNLEQPPA GLPSRVIVFG ISSLPAQALE ALAGLARFSQ VLLCVHNPCR HHWSDIVADK DLLRHQYKRQ QRKQGMPVQL DDESLHQHAH PLLAAWGKQG RDYINLLDSY DDPGSYQGAF SDGRIDLFSE TEPATLLNQL QDDILELRPL TETRELWPEV DLAKDRSVRF HIAHSPQREV EILHDQLLAR FSADPTLRPR DVIVMLPAID NYAPHIRAVF GQLQRNDPRY IPFTLTDQGQ RGRDPLLIAL EHLLKLPDSR FAVSEVLDLL DVPAVRGRFG IRESDLPTLH RWIEGAGIRW GLNAEQRATL GLPEGLEQNS WRFGLRRMLL GYAVGMGEGC DGIEPYDEIG GLDAALIGPL VALLDALDVA NHVLSQPATA AQWGERLNAL LQVFFLAEGE HDEFLLMQLQ ELRDSWLEVC ETVGLQDLLP LTVIREAWLS GLDQGKLSQR FLAGSVNFCT LMPMRAIPFR VVCLLGMNDG DYPRAQQPLD FDLMASDYRP GDRSRREDDR YLLLEALLSA RDQLYISWVG RSIRDNSERP ASVLIGQLRD HLAAGWRLAG SGDSQQAGEQ LLHALTQEHP LQPFSPRYFQ KGSALFSYAH EWQLLHQVGD EAKQSDVGLP PYSSNEALTL MQLQDFLRHP VRHFFSQRLK VFFEALESPT PDEEPFVLDA LQRYSASESL LGAALAEPEN AEQALQAQAR RLQACGMLPL AGFGELLQAE LIQPLPDLLQ RHRHLLQRWP ALVEGALPIH FEHGGHRLEG WLGRVYQADD QSLLSITTVP NTISAGRNSL KWHRLIASWV MHLAACAEGY PLHSALLASD ITLLLAPLPQ HEAAEQLGHL LVSRQAAMNA PLPVAAKTAF AWLAQDDPDK ALAAAARAYE GDGRTSFGER SESPALARQF RDFAALSADE TFEGWCETLY RPLFSAAWQT LGNPESGA
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