Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0738 |
Symbol | |
ID | 6109650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 816080 |
End bp | 819055 |
Gene Length | 2976 bp |
Protein Length | 991 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620497 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001747612 |
Protein GI | 170719924 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000000340339 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGATGA GCTTTAGCCT GACCCAGATG ATCCTGATCA GCGCCGCGTA CCTGATGGTG CTGTTCGGCG TGGCCTGGAT CAGCGAGCGT GGGTTGATAC CCCGCTCGAT CATTCGCCAC CCGCTGACCT ACACCCTGTC GCTGGGCGTC TACGCCAGTG CATGGGCGTT CTACGGCTCG GTGGGCCTGG CCTATCAATA TGGCTACGGC TTCCTCGCCT GTTACCTTGG GGTGTCCGGC GCCTTCCTGC TGGCGCCGGT GCTGCTTTAC CCGATCCTCA AGATCACCCG CACCTACCAG TTGTCGTCAC TGGCCGACCT ACTGGCCTTT CGCTTTCGCA GCACCTGGGC CGGTGCGCTA ACGACCATTT TCATGCTGAT CGGGGTGCTT CCACTGCTGG CGCTGCAAAT TCAGGCAGTG GCCGACTCGA TCAGCATTCT CACCGGTGAA CCGGTCAAGG CCCGGGTGGC CTTTGCCTTC TGCGCACTGA TCATCCTGTT CACCATCTTC TTCGGCTCAC GCCACATCGC CACGCGCGAA AAGCATGAGG GGCTGGTGTT CGCCATCGCC TTCGAGTCGG TGATCAAGCT GCTGGCCTTG GGCGGGATTG GCCTGTACGC CCTGTACGGT GTGTTCGGGG GCCCGCACGG ACTGGAAGTG TGGCTGCTGC AGAACCAGAC AGCCCTGGCA GCGCTGCACA CCCCCCTGCA GGAGGGCCCA TGGCGCACCC TGCTGCTGGT GTTCTTCGCC TCGGCCATCG TCATGCCGCA CATGTACCAC ATGGCCTTCA CCGAAAACCT CAACCCGCGT TCACTGGTCA GCGCCAGCTG GGGCCTACCG CTGTTCCTGC TGTTGATGAG CCTGGCCGTG CCGCTGGTGC TGTGGGCAGG CCTGCGCCTG GGCGCCAGTA CCAACCCCGA GTACTTCACA CTGGGCCTTG GCATCGCCGC CAACAACAAG GCGCTGGCAC TGCTCGCCTA TGTCGGTGGC TTGTCTGCCG CCAGCGGCCT GATCATCGTC ACCACCCTGG CGCTGTCGGG CATGGCGCTC AACCACCTGG TGCTGCCGTT GTACCAGCCA CCGGCCGAAG GCAACATCTA CCGCTGGCTG AAATGGACCC GCCGCGCGCT GATCGTCGCC ATCATCACCG CCGGTTTCAT GTTCTACCTG AACCAGAACA CCCACCAAAG CCTCGCCAAC CTGGGCATCG TCGCCTTCGT CGCCACCTTG CAGTTCCTGC CTGGGGTGCT GTCGGTGCTG TACTGGCCGA CCGCCAACCG CCGTGGTTTC ATCGCCGGCC TGCTGGCCGG CACCCTGGTA TGGATGGTGA CCATGCTGCT GCCCCTGCTG GGTAATCTGC AGGGCTTCTA CATCCCGCTG CTGGACATGA TCTATGTGCT CGACGACACC AGCTGGCACA TGGCAGCGAT TGCCTCGCTG GCAGCCAACG TGTTGTTGTT CACGCTGATT TCACTGTTCA CCAACGCCAG CAGCGAGGAA GTCAGCGCCG CCGAAGCATG CGCGGTGGAC AACGTGCGAC GGCCCCAGCG CCGCGAGCTG CATGCTGCCT CACCGCAGGA ATTCGCCACC CAACTGGCCA AGCCACTGGG TGCCAAGGCT GCACAGAAGG AAGTCGAACA AGCGCTGCGT GACCTCTACC TGCCGTTCGA CGAGCGCCGC CCCTATGCCC TGCGCCGCCT GCGCGACCGC ATCGAAGCCA ACCTGTCGGG CCTGATGGGG CCGAGCGTGG CCCAGGACAT GGTCGAAACC TTCCTGCCTT ACAAGTCAGG CAACGAGAAT TACGTCACCG AAGACATCCA CTTCATCGAA AGCCGCCTGG AAGATTACCA CTCGCGCCTG ACGGGCCTGG CTGCTGAACT CGATGCCTTG CGCCGCTACC ACCGCCAGAC CCTGCAGGAG CTGCCCATGG GCGTCTGCTC GCTGGCCAAG GACCAGGAAA TCCTGATGTG GAACAAGGCC ATGGAGGAGC TGACCGGCAT CGCCGCCAAA CACGTGGTCG GGTCGCGTCT GGTAACCATC GATGAACCCT GGCGCGGCCT CCTGCAAGGT TTCATCAACG TGCCTGATGA GCACTTGCAC AAGCAGCGCC TGGCACTGGA CGGTCAGCCG CGCTGGCTGA ACCTGCACAA AGCAGCCATC GATGAGCCAC TGGCACCCGG CAACAGCGGC CTGGTACTAC TGGTCGAAGA CCTCACCGAG ACCCAGGCCC TGGAAGACAA GCTGGTGCAC TCTGAACGCC TGGCCAGCAT CGGCCGCCTG GCTGCGGGCG TGGCCCACGA GATCGGCAAT CCGATCACCG GCATCGCCTG CCTGGCGCAA AACCTGCGTG AGGAGCGCGA AGGCGACGGC GAGATCATCG AATTGTCGAG CCAGATCCTC GAACAGACCA AACGGGTATC GCGCATCGTG CAGTCGCTGA TGAGCTTTGC CCATGCCGGC GGTAGCCATC AGAACAGCGA AGAGCCTGTG TGCCTGGCCG AAGTGGCCCA GGATGCCATC GGTCTGCTGG CGTTGAACCG GCGCAATTTC GAAGTACAGT TCTTCAACCT CTGCGACCCC GACCACTGGG CCGAGGGGGA CCCTCAGCGC CTGGCCCAGG TACTGATCAA CCTGCTCTCC AACGCGCGCG ACGCTTCGCC GCCCGGCAGC GCCGTGCGGG TACGCACTGA GGTCAGCGAG CACACCGTCG ACCTGATCGT CGAGGACGAA GGCAGTGGGA TTCCGAAGAA CATCATGGAC CGCCTGTTCG AACCTTTCTT CACCACCAAG GACCCGGGCG AGGGAACCGG ACTAGGGCTC GCTCTGGTCT ATTCCATCGT GGAAGAGCAT TATGGGCAAA TCACCATCGA CAGCCCGGCC GACATCGAAC GGCAACGTGG CACACGGATC CGCGTGACCC TGCCCCGGCA TGTCGTAGCG ACGTCCCCTG AAATTCGAGA CCGTCGAGAG AATTGA
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Protein sequence | MPMSFSLTQM ILISAAYLMV LFGVAWISER GLIPRSIIRH PLTYTLSLGV YASAWAFYGS VGLAYQYGYG FLACYLGVSG AFLLAPVLLY PILKITRTYQ LSSLADLLAF RFRSTWAGAL TTIFMLIGVL PLLALQIQAV ADSISILTGE PVKARVAFAF CALIILFTIF FGSRHIATRE KHEGLVFAIA FESVIKLLAL GGIGLYALYG VFGGPHGLEV WLLQNQTALA ALHTPLQEGP WRTLLLVFFA SAIVMPHMYH MAFTENLNPR SLVSASWGLP LFLLLMSLAV PLVLWAGLRL GASTNPEYFT LGLGIAANNK ALALLAYVGG LSAASGLIIV TTLALSGMAL NHLVLPLYQP PAEGNIYRWL KWTRRALIVA IITAGFMFYL NQNTHQSLAN LGIVAFVATL QFLPGVLSVL YWPTANRRGF IAGLLAGTLV WMVTMLLPLL GNLQGFYIPL LDMIYVLDDT SWHMAAIASL AANVLLFTLI SLFTNASSEE VSAAEACAVD NVRRPQRREL HAASPQEFAT QLAKPLGAKA AQKEVEQALR DLYLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDMVET FLPYKSGNEN YVTEDIHFIE SRLEDYHSRL TGLAAELDAL RRYHRQTLQE LPMGVCSLAK DQEILMWNKA MEELTGIAAK HVVGSRLVTI DEPWRGLLQG FINVPDEHLH KQRLALDGQP RWLNLHKAAI DEPLAPGNSG LVLLVEDLTE TQALEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ NLREEREGDG EIIELSSQIL EQTKRVSRIV QSLMSFAHAG GSHQNSEEPV CLAEVAQDAI GLLALNRRNF EVQFFNLCDP DHWAEGDPQR LAQVLINLLS NARDASPPGS AVRVRTEVSE HTVDLIVEDE GSGIPKNIMD RLFEPFFTTK DPGEGTGLGL ALVYSIVEEH YGQITIDSPA DIERQRGTRI RVTLPRHVVA TSPEIRDRRE N
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