Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0714 |
Symbol | |
ID | 6109624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 786143 |
End bp | 788047 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641620471 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001747588 |
Protein GI | 170719900 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.87442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0617842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA ATCTGATCCT GTGGTTGATC ATCGCAGCTG TCCTGGTGAC AGTGATGAAC AACTTCTCCA GCCCTAACGA GCCGCAGACC CTCAACTACT CCGACTTCAT CCAGCAGGTC AAGGATGGCA AGGTCGAGCG TGTGACCGTC GACGGCTACA TCATTACCGG CAAGCGCGCC GACGGCGACA GCTTCAAGAC CGTTCGCCCG GCCATTACCG ATAACGGCCT GATCGGCGAC CTGGTCGACA ATAACGTGGT CGTCGAAGGC AAGCAGCCTG AGCAGCAGAG CATCTGGACT CAGCTGCTGG TGGCGAGCTT CCCGATCCTG GTGATCATTG CCGTGTTCAT GTTCTTCATG CGCCAGATGC AGGGCGGCGC TGGCGGCAAG GGCGGGCCGA TGAGCTTCGG CAAGAGCAAG GCGCGCCTGC TGTCCGAGGA CCAGGTCAAG ACCACTTTGG CTGACGTTGC AGGGTGCGAC GAGGCCAAGG AAGAAGTCGG CGAGCTGGTC GAGTTTCTGC GCGACCCGGG CAAGTTCCAG CGCTTGGGTG GCCGCATCCC GCGTGGTGTG CTGATGGTTG GCCCGCCGGG TACCGGTAAG ACCTTGCTGG CCAAGGCCAT TGCTGGCGAA GCCAAGGTGC CTTTCTTCAC CATTTCCGGT TCGGACTTCG TCGAGATGTT CGTCGGTGTG GGTGCCAGCC GTGTGCGTGA CATGTTCGAG CAGGCCAAAA AGCACGCCCC GTGCATTATC TTCATCGACG AGATCGACGC CGTTGGTCGC CATCGTGGCG CCGGTATGGG CGGCGGTCAC GACGAGCGTG AGCAGACCCT CAACCAGTTG CTGGTCGAGA TGGACGGCTT TGAAATGAAC GATGGCATCA TCGTCATCGC TGCCACCAAC CGTCCGGACG TACTGGACCC GGCCCTGCTG CGTCCTGGCC GCTTCGACCG CCAGGTGGTG GTCGGCCTGC CAGACATCCG TGGTCGTGAG CAGATCCTCA AAGTACACAT GCGCAAGGTT CCGATCGGCG AGAACGTCAA CCCGGCAGTC ATTGCCCGTG GTACTCCAGG CTTCTCCGGT GCTGACCTTG CCAACCTGGT CAACGAAGCC TCGCTGTTCG CTGCGCGCTC GAACAAGCGC CTGGTCGAGA TGAAAGAGTT CGAACTGGCC AAAGACAAGA TCATGATGGG CGCCGAGCGC AAGACCATGG TCATGTCCGA GAAGGAAAAA CAGAACACCG CTTACCACGA GGCCGGTCAC GCCATCGTTG GTCGCCTGGT GCCTGAGCAT GACCCGGTTT ACAAGGTCTC GATCATCCCG CGCGGTCGCG CCCTGGGTGT GACCATGTTC CTGCCCGAGG AAGACCGTTA CAGCCTGTCC AAGCGTGCAC TGATCAGCCA GATCTGCTCG CTGTACGGTG GCCGTATCGC CGAAGAAATG ACCTTGGGCT TCGACGGTGT TACCACCGGT GCCTCGAACG ACATCATGCG TGCCAGCCAG ATTGCCCGGA ACATGGTCAC CAAGTGGGGC CTGTCCGAGA AGCTCGGCCC GTTGATGTAT GCCGAAGAAG AGGGCGAGGT TTTCCTCGGC CGCAGCGCCG GCAGCCAGCA CGCCAGTGTT TCTGGCGAAA CGGCCAAGCT GATCGACTCG GAAGTGCGCA GCATCATTGA CCAGTGCTAT GCCACTGCCA AACAGCTGCT GACCGACAAC CGCGACAAGC TCGATGCCAT GGCCGAAGCG CTGATGAAGT ACGAGACCAT CGACGCCGAC CAGATCGACG ACATCATGTC CGGTCGTACG CCTCGCGAGC CGCGTGACTG GGATGACGAC AAGACTTCGG GCACGCCTGC TGCCCAGAAT GATCGCCCTG AATCGCCGAT CGGCGGCCCA GCGGCTCAAC ACTAA
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Protein sequence | MAKNLILWLI IAAVLVTVMN NFSSPNEPQT LNYSDFIQQV KDGKVERVTV DGYIITGKRA DGDSFKTVRP AITDNGLIGD LVDNNVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PIGENVNPAV IARGTPGFSG ADLANLVNEA SLFAARSNKR LVEMKEFELA KDKIMMGAER KTMVMSEKEK QNTAYHEAGH AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM TLGFDGVTTG ASNDIMRASQ IARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHASV SGETAKLIDS EVRSIIDQCY ATAKQLLTDN RDKLDAMAEA LMKYETIDAD QIDDIMSGRT PREPRDWDDD KTSGTPAAQN DRPESPIGGP AAQH
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